Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0642.Seq
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010309-1|AAQ23627.1|  647|Drosophila melanogaster AT31706p pro...    33   0.70 
AE013599-1680|AAF58395.2|  647|Drosophila melanogaster CG4712-PA...    33   0.70 

>BT010309-1|AAQ23627.1|  647|Drosophila melanogaster AT31706p
           protein.
          Length = 647

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = -2

Query: 503 SWIVARRTSAKAFAKGVFINQERKL---EVRRRLDEREPEKRLPHPRKAAGAQITHSRHG 333
           +W++      +A  K +F  +ERKL   ++  RL ER+ E+      K +G Q    R  
Sbjct: 17  AWLMKFSRDFQAIVKSLFRKEERKLAIKDIMNRLKERDAEEM---KMKKSGEQEGDQRED 73

Query: 332 EVVTKNNDT 306
           E+ +K+ D+
Sbjct: 74  EMASKSQDS 82


>AE013599-1680|AAF58395.2|  647|Drosophila melanogaster CG4712-PA,
           isoform A protein.
          Length = 647

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = -2

Query: 503 SWIVARRTSAKAFAKGVFINQERKL---EVRRRLDEREPEKRLPHPRKAAGAQITHSRHG 333
           +W++      +A  K +F  +ERKL   ++  RL ER+ E+      K +G Q    R  
Sbjct: 17  AWLMKFSRDFQAIVKSLFRKEERKLAIKDIMNRLKERDAEEM---KMKKSGEQEGDQRED 73

Query: 332 EVVTKNNDT 306
           E+ +K+ D+
Sbjct: 74  EMASKSQDS 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,904,777
Number of Sequences: 53049
Number of extensions: 667927
Number of successful extensions: 1607
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)