Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0641.Seq
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q47690 Cluster: Homocysteine S-methyltransferase; n=20;... 121 1e-26
UniRef50_Q4Q0C9 Cluster: Homocysteine S-methyltransferase, putat... 70 3e-11
UniRef50_Q88XC1 Cluster: Homocysteine S-methyltransferase; n=2; ... 60 4e-08
UniRef50_A5VKC8 Cluster: Homocysteine S-methyltransferase; n=2; ... 58 1e-07
UniRef50_O31463 Cluster: YbgG protein; n=6; Firmicutes|Rep: YbgG... 56 6e-07
UniRef50_Q6C0D6 Cluster: Yarrowia lipolytica chromosome F of str... 52 7e-06
UniRef50_Q8LAX0 Cluster: Homocysteine S-methyltransferase 3; n=3... 49 9e-05
UniRef50_UPI000050FD2A Cluster: COG2040: Homocysteine/selenocyst... 48 1e-04
UniRef50_Q3CZT7 Cluster: Homocysteine S-methyltransferase; n=15;... 48 2e-04
UniRef50_A7TSR2 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q9VJ31 Cluster: CG10623-PA; n=11; Diptera|Rep: CG10623-... 45 0.001
UniRef50_Q08985 Cluster: Homocysteine S-methyltransferase 2; n=9... 44 0.002
UniRef50_UPI0000519B36 Cluster: PREDICTED: similar to CG10621-PA... 44 0.003
UniRef50_Q1GBT8 Cluster: Homocysteine S-methyltransferase; n=2; ... 44 0.003
UniRef50_Q67LG1 Cluster: 5-methyltetrahydrofolate S-homocysteine... 43 0.005
UniRef50_UPI00015B4DEA Cluster: PREDICTED: similar to homocystei... 43 0.006
UniRef50_A3ERA3 Cluster: Methionine synthase I, cobalamin-bindin... 43 0.006
UniRef50_Q7D740 Cluster: Homocysteine S-methyltransferase; n=14;... 42 0.011
UniRef50_A6G853 Cluster: Homocysteine methyltransferase; n=1; Pl... 42 0.014
UniRef50_Q0BQM8 Cluster: Homocysteine S-methyltransferase; n=1; ... 41 0.018
UniRef50_A3TGH3 Cluster: Homocysteine methyltransferase; n=1; Ja... 41 0.018
UniRef50_A5CB34 Cluster: Putative uncharacterized protein; n=1; ... 41 0.024
UniRef50_Q0TXM4 Cluster: Putative uncharacterized protein; n=1; ... 41 0.024
UniRef50_Q5PNQ3 Cluster: Novel protein containing a homocysteine... 40 0.032
UniRef50_Q4S116 Cluster: Chromosome 1 SCAF14770, whole genome sh... 40 0.042
UniRef50_Q49V93 Cluster: Putative homocysteine S-methyltransfera... 40 0.042
UniRef50_A4XIN5 Cluster: Methylenetetrahydrofolate reductase; n=... 40 0.042
UniRef50_Q2S678 Cluster: Vitamin B12-dependent methionine syntha... 40 0.056
UniRef50_Q0AX05 Cluster: 5-methyltetrahydrofolate-homocysteine m... 40 0.056
UniRef50_A4B5J7 Cluster: Homocysteine S-methyltransferase family... 39 0.074
UniRef50_Q748M7 Cluster: Methylenetetrahydrofolate reductase; n=... 38 0.13
UniRef50_A7S7I8 Cluster: Predicted protein; n=2; Nematostella ve... 38 0.13
UniRef50_A5KL27 Cluster: Putative uncharacterized protein; n=4; ... 37 0.30
UniRef50_A3M360 Cluster: Putative homocysteine S-methyltransfera... 37 0.30
UniRef50_Q2LWJ5 Cluster: 5-methyltetrahydrofolate--homocysteine ... 37 0.39
UniRef50_Q2F5Q8 Cluster: Homocysteine S-methyltransferase; n=4; ... 37 0.39
UniRef50_Q8DCJ7 Cluster: Methionine synthase; n=51; Bacteria|Rep... 37 0.39
UniRef50_Q98KX0 Cluster: Mlr1281 protein; n=4; Proteobacteria|Re... 36 0.52
UniRef50_Q8R927 Cluster: Methionine synthase I, cobalamin-bindin... 36 0.52
UniRef50_A0Z513 Cluster: Putative uncharacterized protein; n=1; ... 36 0.52
UniRef50_A0V2D8 Cluster: 5-methyltetrahydrofolate--homocysteine ... 36 0.69
UniRef50_A7Q8M9 Cluster: Chromosome chr5 scaffold_64, whole geno... 36 0.69
UniRef50_Q6BZK6 Cluster: Debaryomyces hansenii chromosome A of s... 36 0.69
UniRef50_Q2LQ11 Cluster: Methylenetetrahydrofolate reductase; n=... 36 0.91
UniRef50_Q20HV9 Cluster: Msh; n=2; Agrobacterium tumefaciens|Rep... 36 0.91
UniRef50_A4EKV4 Cluster: Methionine synthase I; n=5; Proteobacte... 36 0.91
UniRef50_Q59QD2 Cluster: Putative uncharacterized protein SAM4; ... 36 0.91
UniRef50_A0RW49 Cluster: Methionine synthase I (Cobalamin-depend... 36 0.91
UniRef50_UPI0000E4900F Cluster: PREDICTED: similar to 5-methylte... 35 1.2
UniRef50_Q5FKC1 Cluster: Homocysteine S-methyltransferase; n=2; ... 35 1.2
UniRef50_A7H6G1 Cluster: Methionine synthase; n=3; Bacteria|Rep:... 35 1.2
UniRef50_A3UPV1 Cluster: Homocysteine S-methyltransferase family... 35 1.2
UniRef50_Q2JJL4 Cluster: Methionine synthase; n=25; Cyanobacteri... 35 1.6
UniRef50_A6PRW5 Cluster: Methylenetetrahydrofolate reductase; n=... 35 1.6
UniRef50_A0VUF3 Cluster: Homocysteine S-methyltransferase; n=5; ... 34 2.1
UniRef50_Q4Q793 Cluster: Putative uncharacterized protein; n=2; ... 34 2.1
UniRef50_Q30ZI4 Cluster: Vitamin B12-dependent methionine syntha... 34 2.8
UniRef50_Q1IQK2 Cluster: 5-methyltetrahydrofolate--homocysteine ... 34 2.8
UniRef50_Q1IL23 Cluster: Methylenetetrahydrofolate reductase; n=... 34 2.8
UniRef50_A6DGP4 Cluster: 5-methyltetrahydrofolate--homocysteine ... 34 2.8
UniRef50_A4E8K1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_A5DCB0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_Q3JMG8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q0AAY4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_A4J6L9 Cluster: Homocysteine S-methyltransferase; n=1; ... 33 3.7
UniRef50_O16386 Cluster: Putative uncharacterized protein K12B6.... 33 3.7
UniRef50_Q9KCE2 Cluster: Methylenetetrahydrofolate reductase; n=... 33 4.9
UniRef50_Q2BLG7 Cluster: Bacterial extracellular solute-binding ... 33 4.9
UniRef50_Q15S12 Cluster: Homocysteine S-methyltransferase; n=1; ... 33 4.9
UniRef50_Q4FMM0 Cluster: Homocysteine S-methyltransferase; n=3; ... 33 6.4
UniRef50_O54095 Cluster: Putative oxidase; n=1; Streptomyces coe... 33 6.4
UniRef50_A7CWS4 Cluster: Homocysteine S-methyltransferase precur... 33 6.4
UniRef50_A6Q2F4 Cluster: 5-methyltetrahydrofolate--homocysteine ... 33 6.4
UniRef50_A4TZ08 Cluster: Hydrolases of HD superfamily; n=1; Magn... 33 6.4
UniRef50_Q9VFR7 Cluster: CG14366-PA; n=1; Drosophila melanogaste... 33 6.4
UniRef50_Q7RZ57 Cluster: Predicted protein; n=2; Neurospora cras... 33 6.4
UniRef50_A6S563 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_Q98194 Cluster: MC026L; n=2; Molluscum contagiosum viru... 32 8.5
UniRef50_Q8DJI3 Cluster: Tlr1240 protein; n=1; Synechococcus elo... 32 8.5
UniRef50_Q93A68 Cluster: Methylenetetrahydrofolate reductase; n=... 32 8.5
UniRef50_A5ZUF2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_A5NMD1 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 32 8.5
UniRef50_A1SWN6 Cluster: Homocysteine S-methyltransferase; n=2; ... 32 8.5
>UniRef50_Q47690 Cluster: Homocysteine S-methyltransferase; n=20;
Bacteria|Rep: Homocysteine S-methyltransferase -
Escherichia coli (strain K12)
Length = 310
Score = 121 bits (291), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCA 253
+ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCA
Sbjct: 223 VALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCA 275
Score = 75.4 bits (177), Expect = 9e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 249 ARXADYLPQWQAAGARLIGGCCRTTPADIAALKART 356
A+ ADYLPQWQAAGARLIGGCCRTTPADIAALKAR+
Sbjct: 275 AQLADYLPQWQAAGARLIGGCCRTTPADIAALKARS 310
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 4 FSFTLRDXNHLSDGTPLRDVVALLAGYPQV 93
FSFTLRD HLSDGTPLRDVVALLAGYPQV
Sbjct: 193 FSFTLRDSEHLSDGTPLRDVVALLAGYPQV 222
>UniRef50_Q4Q0C9 Cluster: Homocysteine S-methyltransferase,
putative; n=3; Leishmania|Rep: Homocysteine
S-methyltransferase, putative - Leishmania major
Length = 339
Score = 70.1 bits (164), Expect = 3e-11
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWH 232
+A+G+NCI + +A L HLH LT +PLVVY NSGE YDAV++TWH
Sbjct: 242 VAVGVNCIPMAEASAVLAHLHTLTTMPLVVYTNSGESYDAVTRTWH 287
Score = 42.3 bits (95), Expect = 0.008
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAALKA 350
+W + GARL+GGCCRT P+DIA A
Sbjct: 305 EWASHGARLVGGCCRTGPSDIAGAAA 330
>UniRef50_Q88XC1 Cluster: Homocysteine S-methyltransferase; n=2;
Bacteria|Rep: Homocysteine S-methyltransferase -
Lactobacillus plantarum
Length = 309
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHH-HGEH 247
+A+G+NC LEN AL L +PL+VYPNSG+ YD V+KTW H H
Sbjct: 215 VAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYDPVTKTWQETHLSH 266
Score = 54.0 bits (124), Expect = 2e-06
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAAL 344
A ++PQW AAGAR+IGGCCRTTP DIA +
Sbjct: 269 ASFVPQWLAAGARIIGGCCRTTPKDIATV 297
>UniRef50_A5VKC8 Cluster: Homocysteine S-methyltransferase; n=2;
Lactobacillus reuteri|Rep: Homocysteine
S-methyltransferase - Lactobacillus reuteri F275
Length = 310
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHH-HG 241
A+G+NCI LE TAA++ +H +T P++ YPNS YD +KTW + HG
Sbjct: 218 AVGVNCIPLEEVTAAIETVHQVTEKPVIAYPNSSATYDPTTKTWSYPHG 266
Score = 52.8 bits (121), Expect = 6e-06
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 261 DYLPQWQAAGARLIGGCCRTTPADIAALKARTEG 362
DYLPQW AAG ++GGCC TTP DIAAL +G
Sbjct: 272 DYLPQWIAAGLIIVGGCCTTTPQDIAALHEYLKG 305
>UniRef50_O31463 Cluster: YbgG protein; n=6; Firmicutes|Rep: YbgG
protein - Bacillus subtilis
Length = 315
Score = 56.0 bits (129), Expect = 6e-07
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 86 RRWLALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXG-G 262
R+ ALGINC L++ + ++ L T P++VYPNSGE YD +KTW +G CA G
Sbjct: 220 RQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGEQYDPETKTW--NGAACAESYG 277
Query: 263 LSA 271
SA
Sbjct: 278 ASA 280
Score = 38.7 bits (86), Expect = 0.098
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAALKARTEGL 365
W GARLIGGCCRT P +I + A L
Sbjct: 283 WHEKGARLIGGCCRTKPENIQEIAAWARSL 312
>UniRef50_Q6C0D6 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 348
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = +2
Query: 101 LGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXGGLSAAVA 280
LG+NC A +L L T L L+VYPNSGE YD +KTW +C L AA
Sbjct: 259 LGVNCCAETVAKLSLDILQQHTSLQLIVYPNSGEVYDGATKTW---SGNCDSSFLEAATL 315
Query: 281 GRWRT 295
W+T
Sbjct: 316 SDWQT 320
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 267 LPQWQAAGARLIGGCCRTTPADIAALKARTEG 362
L WQ + ++GGCCRT P IA L+ + +G
Sbjct: 315 LSDWQTS-VSILGGCCRTGPPHIAFLRHKVDG 345
>UniRef50_Q8LAX0 Cluster: Homocysteine S-methyltransferase 3; n=30;
Magnoliophyta|Rep: Homocysteine S-methyltransferase 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 347
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTW 229
+A+GINC A A + L +T P+VVYPNSGE YD ++K W
Sbjct: 245 VAIGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKW 289
Score = 41.5 bits (93), Expect = 0.014
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAAL 344
Y+ +W+ AGA L GGCCRTTP I A+
Sbjct: 303 YVSKWRDAGASLFGGCCRTTPNTIRAI 329
>UniRef50_UPI000050FD2A Cluster: COG2040:
Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent); n=1; Brevibacterium
linens BL2|Rep: COG2040: Homocysteine/selenocysteine
methylase (S-methylmethionine-dependent) -
Brevibacterium linens BL2
Length = 308
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTW 229
A+G+NC+ AL L T LPL+ YPNSGE YDA + W
Sbjct: 220 AVGVNCVRPSLVAPALAALASATDLPLIAYPNSGETYDAATMEW 263
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3
Query: 267 LPQWQAAGARLIGGCCRTTPADIAAL 344
L W +AG R+IGGCCRTTPADIA L
Sbjct: 276 LAPWVSAGVRIIGGCCRTTPADIAGL 301
>UniRef50_Q3CZT7 Cluster: Homocysteine S-methyltransferase; n=15;
Streptococcus|Rep: Homocysteine S-methyltransferase -
Streptococcus agalactiae H36B
Length = 351
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEH 247
+ALGINC + LQ + T PLV YPNSGE YD S++W +H
Sbjct: 263 VALGINCSSPSLVADFLQAIAEQTDKPLVTYPNSGEIYDGASQSWQSSRDH 313
Score = 42.3 bits (95), Expect = 0.008
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAAL 344
WQ GA+++GGCCRT PADIA L
Sbjct: 324 WQKLGAQVVGGCCRTRPADIADL 346
>UniRef50_A7TSR2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 323
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 104 GINCIALENTTAALQHLH-GLTVLPLVVYPNSGEHYDAVSKTW 229
G NCI+ + + + LH + LPL+VYPNSGE YD ++K W
Sbjct: 234 GANCISFKYASENISKLHQAIPTLPLIVYPNSGEIYDPLTKKW 276
Score = 37.1 bits (82), Expect = 0.30
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 261 DYLPQWQAAGARLIGGCCRTTPADIAALK 347
D + + + + R++GGCCRTTP DI +K
Sbjct: 288 DLIKELRTSNVRIVGGCCRTTPDDINKIK 316
>UniRef50_Q9VJ31 Cluster: CG10623-PA; n=11; Diptera|Rep: CG10623-PA
- Drosophila melanogaster (Fruit fly)
Length = 331
Score = 44.8 bits (101), Expect = 0.001
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAALKARTEGLS 368
++P+W G R++GGCCR P D+ A++ +GL+
Sbjct: 294 FVPEWIQLGVRIVGGCCRVYPTDVLAIRKYVDGLN 328
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +2
Query: 65 LRCWRVIR------RWLALGINCIALENTTAALQHLH---GLTVLPLVVYPNSGEHYDAV 217
L WR+++ R L +G+NC+ T L L G +PLVVY N GE YD
Sbjct: 221 LSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVVYSNRGEIYDVE 280
Query: 218 SKTWHHHGE 244
W GE
Sbjct: 281 QGDWTGTGE 289
>UniRef50_Q08985 Cluster: Homocysteine S-methyltransferase 2; n=9;
Saccharomycetaceae|Rep: Homocysteine S-methyltransferase
2 - Saccharomyces cerevisiae (Baker's yeast)
Length = 325
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 101 LGINCIALENTTAALQHLH-GLTVLPLVVYPNSGEHYDAVSKTW 229
LGINC++ + L+ LH L + L+ YPNSGE YD K W
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIW 278
Score = 39.5 bits (88), Expect = 0.056
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAALKA 350
Q+ ++GAR+IGGCCRT+P DI + A
Sbjct: 294 QYISSGARIIGGCCRTSPKDIQEISA 319
>UniRef50_UPI0000519B36 Cluster: PREDICTED: similar to CG10621-PA;
n=2; Apis mellifera|Rep: PREDICTED: similar to
CG10621-PA - Apis mellifera
Length = 320
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +2
Query: 68 RCWRVIR-RWLALGINCIALENTTAALQHLH---GLTVLPLVVYPNSGEHYDAVSKTWHH 235
RC++ + + +A+G+NCIA ++ T L++++ G +PL+ YPNSGE Y + ++ W
Sbjct: 213 RCYKTLPGQIVAIGVNCIAPKDVTPLLKNINMGSGNDFIPLIAYPNSGEIY-SPNEGWIK 271
Query: 236 HGEHCA 253
+ E CA
Sbjct: 272 N-ESCA 276
Score = 32.3 bits (70), Expect = 8.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAALK 347
++P+W G R +GGCCR +I +++
Sbjct: 281 FIPEWLEFGIRYLGGCCRMYAENIKSIR 308
>UniRef50_Q1GBT8 Cluster: Homocysteine S-methyltransferase; n=2;
Lactobacillus delbrueckii subsp. bulgaricus|Rep:
Homocysteine S-methyltransferase - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC 11842 /
DSM20081)
Length = 310
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXGGLSAA 274
A G NC L T +++L + LP+VVYPNSG YD K W + E G AA
Sbjct: 219 AAGANCFKLAWTVDVVKNLRA-SKLPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGAA 276
Score = 42.7 bits (96), Expect = 0.006
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAALKA 350
W AAGA+L+GGCC T P DIA L A
Sbjct: 277 WLAAGAKLVGGCCTTMPEDIAGLAA 301
>UniRef50_Q67LG1 Cluster: 5-methyltetrahydrofolate S-homocysteine
methyltransferase; n=2; Firmicutes|Rep:
5-methyltetrahydrofolate S-homocysteine
methyltransferase - Symbiobacterium thermophilum
Length = 859
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGL 365
A Y P+ AGA L+GGCC TTP I L+A EGL
Sbjct: 255 AAYGPKLVEAGAALVGGCCGTTPEHIRRLRAAVEGL 290
>UniRef50_UPI00015B4DEA Cluster: PREDICTED: similar to homocysteine
S-methyltransferase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to homocysteine S-methyltransferase -
Nasonia vitripennis
Length = 341
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +2
Query: 65 LRCWRVIR-RWLALGINCIALENTTAALQHLHGLTV---LPLVVYPNSGEHYDAVSKTW 229
L+C++ + +A G+NC+A + T L+ ++ + +P+V YPNSGE Y + + +W
Sbjct: 232 LKCYKAASGQIVACGVNCLAPRSVTPLLKSINEKEINQFIPMVAYPNSGEKYSSTTFSW 290
>UniRef50_A3ERA3 Cluster: Methionine synthase I, cobalamin-binding
domain; n=2; Leptospirillum|Rep: Methionine synthase I,
cobalamin-binding domain - Leptospirillum sp. Group II
UBA
Length = 815
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 231 IITVNIARXADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHR 380
+ N A + PQ+ AGA +IGGCC TTP + L +G+S + R
Sbjct: 247 VYPANAEDVARFAPQFVEAGANIIGGCCGTTPEYVRLLSRMLKGISPISR 296
>UniRef50_Q7D740 Cluster: Homocysteine S-methyltransferase; n=14;
Actinomycetales|Rep: Homocysteine S-methyltransferase -
Mycobacterium tuberculosis
Length = 302
Score = 41.9 bits (94), Expect = 0.011
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXGGLSAA 274
+A+G+NC A ++ A+ T P++VYPNSGE +D + W G G S
Sbjct: 208 VAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPNSGEGWDGRRRAW--VGPR-RFSGSSGQ 264
Query: 275 VAGRWRTVDWRVLSHHACGYRRVKSAN*G 361
+A W R++ C R + A G
Sbjct: 265 LAREWVAAGARIVG-GCCRVRPIDIAEIG 292
Score = 41.9 bits (94), Expect = 0.011
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAAL 344
+W AAGAR++GGCCR P DIA +
Sbjct: 268 EWVAAGARIVGGCCRVRPIDIAEI 291
>UniRef50_A6G853 Cluster: Homocysteine methyltransferase; n=1;
Plesiocystis pacifica SIR-1|Rep: Homocysteine
methyltransferase - Plesiocystis pacifica SIR-1
Length = 325
Score = 41.5 bits (93), Expect = 0.014
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXGGLSAAV 277
ALG+NC+ AL+ L T PLV YPNSGE + + + W AA+
Sbjct: 234 ALGVNCVGPREVAPALEVLAACTDRPLVAYPNSGERW--IDRGW---SGAALEPNKFAAL 288
Query: 278 AGRWRTVDWRVL 313
A RW + R++
Sbjct: 289 AERWFELGARLI 300
Score = 36.7 bits (81), Expect = 0.39
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAAL 344
+W GARLIGGCCRT A I AL
Sbjct: 291 RWFELGARLIGGCCRTNYAHIQAL 314
>UniRef50_Q0BQM8 Cluster: Homocysteine S-methyltransferase; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Homocysteine
S-methyltransferase - Granulobacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1)
Length = 313
Score = 41.1 bits (92), Expect = 0.018
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALK 347
A+ W GAR++GGCCRT P DI AL+
Sbjct: 277 AEQARSWLRLGARIVGGCCRTRPDDIRALR 306
Score = 39.5 bits (88), Expect = 0.056
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHH 235
A+GINC A ++ L LP++VYPN+GE +D V++ W H
Sbjct: 226 AIGINCTDPVLVPALIRCLRR-GGLPVIVYPNAGEPFDLVTRCWGH 270
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 7 SFTLRDXNHLSDGTPLRDVVALLAGYPQVA 96
SF++RD H++DGTPLR V +A P VA
Sbjct: 196 SFSVRDAAHIADGTPLRLCVQAMASCPFVA 225
>UniRef50_A3TGH3 Cluster: Homocysteine methyltransferase; n=1;
Janibacter sp. HTCC2649|Rep: Homocysteine
methyltransferase - Janibacter sp. HTCC2649
Length = 305
Score = 41.1 bits (92), Expect = 0.018
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHG 241
+A+G+NC A + L+ G +P V+YPN+G YD SKTW G
Sbjct: 219 IAVGVNCTAPRHIDELLEA--GGPNVPYVIYPNAGATYDPGSKTWTEDG 265
>UniRef50_A5CB34 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 347
Score = 40.7 bits (91), Expect = 0.024
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 86 RRWLALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTW 229
++ +++GINC + + +T P+++YPNSGE YD K W
Sbjct: 281 KKVVSVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDPEQKEW 328
>UniRef50_Q0TXM4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 319
Score = 40.7 bits (91), Expect = 0.024
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVL-PLVVYPNSGEHYDAVSKTWHHHGEHCAXGGLSA 271
+ LG NC+ + AAL++L L +VVYPNSGE ++A ++ W G GL++
Sbjct: 238 VGLGFNCVPDDLALAALKNLKPLVKRGTMVVYPNSGEQWNAKAREW--EGSRTEGEGLAS 295
Query: 272 AVAGRWRTVDW 304
+TV+W
Sbjct: 296 ------KTVEW 300
Score = 38.7 bits (86), Expect = 0.098
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 4 FSFTLRDXNHLSDGTPLRDVVALLAGYPQVAG 99
F+FTLRD H++DGT L D+ AL QV G
Sbjct: 208 FTFTLRDAEHIADGTSLVDIAALFETAEQVVG 239
Score = 38.7 bits (86), Expect = 0.098
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTP 326
+W+ AGA LIGGCCRTTP
Sbjct: 299 EWERAGAGLIGGCCRTTP 316
>UniRef50_Q5PNQ3 Cluster: Novel protein containing a homocysteine
S-methyltransferase domain; n=7; Euteleostomi|Rep: Novel
protein containing a homocysteine S-methyltransferase
domain - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 318
Score = 40.3 bits (90), Expect = 0.032
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAALK 347
+W+A GA IGGCCR PADI LK
Sbjct: 288 EWKAQGALWIGGCCRVRPADITELK 312
>UniRef50_Q4S116 Cluster: Chromosome 1 SCAF14770, whole genome
shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 1
SCAF14770, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 372
Score = 39.9 bits (89), Expect = 0.042
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAALKARTEGLSG 371
W GA LIGGCCR +PA +A L+ +G G
Sbjct: 315 WVKQGAALIGGCCRISPAHVAKLRRHLKGSRG 346
>UniRef50_Q49V93 Cluster: Putative homocysteine S-methyltransferase;
n=1; Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305|Rep: Putative homocysteine
S-methyltransferase - Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 /DSM 20229)
Length = 301
Score = 39.9 bits (89), Expect = 0.042
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 261 DYLPQWQAAGARLIGGCCRTTPADIAALKARTE 359
+ +P W G ++IGGCC+TTP +I ++K E
Sbjct: 267 EQIPGWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 104 GINCIALENTTAALQHLHGLTVLP--LVVYPNSGEHYDAVSKTWHHHG 241
GINC ++ A+ GL +P + +YPN G Y+AV K W G
Sbjct: 215 GINCSSVAGINKAISK--GLKNVPQTIALYPNGGAQYNAVEKEWESVG 260
>UniRef50_A4XIN5 Cluster: Methylenetetrahydrofolate reductase; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Methylenetetrahydrofolate reductase -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 604
Score = 39.9 bits (89), Expect = 0.042
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLS 368
A ++ ++ GA++IGGCC TTP I A+K R + +S
Sbjct: 256 ASFVDEYVKYGAKIIGGCCGTTPEHIKAIKERIKTIS 292
>UniRef50_Q2S678 Cluster: Vitamin B12-dependent methionine synthase
family protein; n=1; Salinibacter ruber DSM 13855|Rep:
Vitamin B12-dependent methionine synthase family protein
- Salinibacter ruber (strain DSM 13855)
Length = 320
Score = 39.5 bits (88), Expect = 0.056
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHRS 383
++ W +AGA ++GGCC P IA L+ +G + R+
Sbjct: 279 HVEDWLSAGANIVGGCCEVGPGHIAHLRTTVDGAADARRA 318
>UniRef50_Q0AX05 Cluster: 5-methyltetrahydrofolate-homocysteine
methyltransferase, truncation; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep:
5-methyltetrahydrofolate-homocysteine methyltransferase,
truncation - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 839
Score = 39.5 bits (88), Expect = 0.056
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHRS 383
A+Y + + GA +IGGCC TTP I A+ + GLS R+
Sbjct: 255 AEYALKLRDVGANIIGGCCGTTPEHIKAIASTLRGLSPRKRT 296
>UniRef50_A4B5J7 Cluster: Homocysteine S-methyltransferase family
protein; n=1; Alteromonas macleodii 'Deep ecotype'|Rep:
Homocysteine S-methyltransferase family protein -
Alteromonas macleodii 'Deep ecotype'
Length = 305
Score = 39.1 bits (87), Expect = 0.074
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 240 VNIARXADYLPQWQAAGARLIGGCCRTTPADIAAL 344
V AR DY+ W AAGA +GGCC P I A+
Sbjct: 262 VTPARYLDYVKSWIAAGASTVGGCCGIGPEHIKAI 296
>UniRef50_Q748M7 Cluster: Methylenetetrahydrofolate reductase; n=8;
Desulfuromonadales|Rep: Methylenetetrahydrofolate
reductase - Geobacter sulfurreducens
Length = 605
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHRSL 386
AD + AGA L+GGCC TTP + L R GL R++
Sbjct: 253 ADRAVEMVGAGAALVGGCCGTTPEHVRCLAQRLAGLRPAARTV 295
>UniRef50_A7S7I8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 265
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 LALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHY-DAVSKTWHHHG 241
+A+G NC + T+ ++ L T LP+V+YPN GE + D W G
Sbjct: 195 IAVGNNCCSPVYVTSLIRRLKPKTTLPIVIYPNKGEEWIDRRYSEWQDTG 244
>UniRef50_A5KL27 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 826
Score = 37.1 bits (82), Expect = 0.30
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTE 359
A Y+ Q GA +IGGCC TTP I A++ R E
Sbjct: 259 AAYMEQIVRMGACVIGGCCGTTPEHIRAMRKRCE 292
>UniRef50_A3M360 Cluster: Putative homocysteine S-methyltransferase
family protein; n=1; Acinetobacter baumannii ATCC
17978|Rep: Putative homocysteine S-methyltransferase
family protein - Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755)
Length = 234
Score = 37.1 bits (82), Expect = 0.30
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAAL 344
+ QWQ AGA L+GGCC P IA L
Sbjct: 202 FAKQWQQAGASLVGGCCGIGPEHIAEL 228
>UniRef50_Q2LWJ5 Cluster: 5-methyltetrahydrofolate--homocysteine
methyltransferase; n=3; Bacteria|Rep:
5-methyltetrahydrofolate--homocysteine methyltransferase
- Syntrophus aciditrophicus (strain SB)
Length = 813
Score = 36.7 bits (81), Expect = 0.39
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAAL 344
A + P + AAG L+GGCC TTP I AL
Sbjct: 256 ASHGPAFAAAGVNLLGGCCGTTPDHIQAL 284
>UniRef50_Q2F5Q8 Cluster: Homocysteine S-methyltransferase; n=4;
Endopterygota|Rep: Homocysteine S-methyltransferase -
Bombyx mori (Silk moth)
Length = 325
Score = 36.7 bits (81), Expect = 0.39
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAALKARTE 359
+W G R IGGCCRT DI+ ++ T+
Sbjct: 289 EWLDLGVRYIGGCCRTNDVDISRIRIETD 317
>UniRef50_Q8DCJ7 Cluster: Methionine synthase; n=51; Bacteria|Rep:
Methionine synthase - Vibrio vulnificus
Length = 1226
Score = 36.7 bits (81), Expect = 0.39
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 258 ADYLPQWQAAG-ARLIGGCCRTTPADIAALKARTEGLS 368
A+++ +W +G LIGGCC TTP I + EG+S
Sbjct: 293 AEHVKEWAQSGFLNLIGGCCGTTPEHIRHMAMAVEGVS 330
>UniRef50_Q98KX0 Cluster: Mlr1281 protein; n=4; Proteobacteria|Rep:
Mlr1281 protein - Rhizobium loti (Mesorhizobium loti)
Length = 301
Score = 36.3 bits (80), Expect = 0.52
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAALKARTE 359
W AGA ++GGCC P IAAL+ R +
Sbjct: 262 WVEAGADIVGGCCEVGPPHIAALRDRLQ 289
>UniRef50_Q8R927 Cluster: Methionine synthase I, cobalamin-binding
domain; n=14; Clostridia|Rep: Methionine synthase I,
cobalamin-binding domain - Thermoanaerobacter
tengcongensis
Length = 803
Score = 36.3 bits (80), Expect = 0.52
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGL 365
A + PQ GA ++GGCC TTP I +K E L
Sbjct: 253 ASFFPQLVEKGACIVGGCCGTTPYYIKLVKKAVENL 288
>UniRef50_A0Z513 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2080|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2080
Length = 306
Score = 36.3 bits (80), Expect = 0.52
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 249 ARXADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHRSL 386
A D QW GA ++GGCC PA I AL +G+ G R L
Sbjct: 257 AAYTDMSLQWLELGASILGGCCEVGPAHIEAL---AQGIIGKGRQL 299
>UniRef50_A0V2D8 Cluster: 5-methyltetrahydrofolate--homocysteine
methyltransferase; n=1; Clostridium cellulolyticum
H10|Rep: 5-methyltetrahydrofolate--homocysteine
methyltransferase - Clostridium cellulolyticum H10
Length = 229
Score = 35.9 bits (79), Expect = 0.69
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 252 RXADYLPQWQAAGARLIGGCCRTTPADIAALKARTEG 362
+ A+Y ++ GARL+GGCC T P IA + G
Sbjct: 45 KFAEYAQEFIKYGARLVGGCCGTRPEFIAEISKAVSG 81
>UniRef50_A7Q8M9 Cluster: Chromosome chr5 scaffold_64, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_64, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 869
Score = 35.9 bits (79), Expect = 0.69
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 304 AGAVAPRLRISPR*KRELRVYRVYIVHCRPDKRXQSXIAXWRHKRLIRAYKTTKRYAASA 483
A A R++++ R +R L++ + +C P+ ++ +A R + R Y+T KR AA+A
Sbjct: 675 AADAAARIQVAFR-ERSLKLRTKAVENCNPEIEARNIVAAMRIQHAFRNYETRKRMAAAA 733
Query: 484 R 486
R
Sbjct: 734 R 734
>UniRef50_Q6BZK6 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 351
Score = 35.9 bits (79), Expect = 0.69
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 92 WLALGINCIALENTTAALQHLHGLTVL---PLVVYPNSGEHYD 211
++ LG NC+ LE T L ++ L + PL+ YPN+G +YD
Sbjct: 252 FIGLGCNCVPLEIATNILLNMSDLNNVHRFPLIAYPNAGLNYD 294
>UniRef50_Q2LQ11 Cluster: Methylenetetrahydrofolate reductase; n=1;
Syntrophus aciditrophicus SB|Rep:
Methylenetetrahydrofolate reductase - Syntrophus
aciditrophicus (strain SB)
Length = 618
Score = 35.5 bits (78), Expect = 0.91
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 261 DYLPQWQAAGARLIGGCCRTTPADIAALKARTEGLSGLHR 380
+Y ++ G R IGGCC PA IA GLSG+ +
Sbjct: 258 EYAKKFIELGVRGIGGCCGVHPAHIATAARAVRGLSGVRK 297
>UniRef50_Q20HV9 Cluster: Msh; n=2; Agrobacterium tumefaciens|Rep:
Msh - Agrobacterium tumefaciens
Length = 316
Score = 35.5 bits (78), Expect = 0.91
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 240 VNIARXADYLPQWQAAGARLIGGCCRTTPADIAALK 347
+N + + +W +AGA +IGGCC P IA LK
Sbjct: 271 LNPSGYLQFAQRWVSAGATIIGGCCGIGPEHIAELK 306
>UniRef50_A4EKV4 Cluster: Methionine synthase I; n=5;
Proteobacteria|Rep: Methionine synthase I - Roseobacter
sp. CCS2
Length = 339
Score = 35.5 bits (78), Expect = 0.91
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 249 ARXADYLPQWQAAGARLIGGCCRTTPADIAALKARTE 359
A ADY + GA +IGGCC TTP + A++ E
Sbjct: 259 ALMADYAVLARDCGATIIGGCCGTTPEHLRAMREALE 295
>UniRef50_Q59QD2 Cluster: Putative uncharacterized protein SAM4;
n=1; Candida albicans|Rep: Putative uncharacterized
protein SAM4 - Candida albicans (Yeast)
Length = 311
Score = 35.5 bits (78), Expect = 0.91
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 89 RWLALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYD 211
R++A+GINC + EN +L T PL +YPN G YD
Sbjct: 222 RFVAVGINCTSYENVDQISTYL---TDFPLFIYPNLGFVYD 259
>UniRef50_A0RW49 Cluster: Methionine synthase I
(Cobalamin-dependent), methyltransferase domain; n=1;
Cenarchaeum symbiosum|Rep: Methionine synthase I
(Cobalamin-dependent), methyltransferase domain -
Cenarchaeum symbiosum
Length = 317
Score = 35.5 bits (78), Expect = 0.91
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 294 RLIGGCCRTTPADIAALKARTEG 362
R++GGCC TTPA I+AL+ +G
Sbjct: 289 RMVGGCCGTTPAHISALRRAIDG 311
>UniRef50_UPI0000E4900F Cluster: PREDICTED: similar to
5-methyltetrahydrofolate:homocysteine methyltransferase;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to 5-methyltetrahydrofolate:homocysteine
methyltransferase - Strongylocentrotus purpuratus
Length = 172
Score = 35.1 bits (77), Expect = 1.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 261 DYLPQWQAAGARLIGGCCRTTPADI 335
D +P W AG + IGGCC T+ DI
Sbjct: 138 DLIPAWIEAGVKYIGGCCGTSALDI 162
>UniRef50_Q5FKC1 Cluster: Homocysteine S-methyltransferase; n=2;
Lactobacillus|Rep: Homocysteine S-methyltransferase -
Lactobacillus acidophilus
Length = 310
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 98 ALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTW 229
A+G NC T A+ + T ++VYPN G YD + W
Sbjct: 218 AVGANCFKPFLATTAIDRMRMFTQKTIIVYPNLGGVYDEFERNW 261
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 7 SFTLRDXNHLSDGTPLRDVVALLAGYPQV 93
+FTL D +SDGTPL+ V+ L Y QV
Sbjct: 188 TFTLHDTTKISDGTPLKKVMQKLNEYEQV 216
>UniRef50_A7H6G1 Cluster: Methionine synthase; n=3; Bacteria|Rep:
Methionine synthase - Anaeromyxobacter sp. Fw109-5
Length = 1149
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 ARXADYLPQWQAA-GARLIGGCCRTTPADIAALKARTEGLSGLHRS 383
A AD L + A G L+GGCC TTP + A+ R GL R+
Sbjct: 272 AALADALAGFVAEYGVELVGGCCGTTPEHMRAVVERVRGLRAPRRA 317
>UniRef50_A3UPV1 Cluster: Homocysteine S-methyltransferase family
protein; n=6; Vibrionales|Rep: Homocysteine
S-methyltransferase family protein - Vibrio splendidus
12B01
Length = 299
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 264 YLPQWQAAGARLIGGCCRTTPADIAAL 344
Y +W A GA +IGGCC P I AL
Sbjct: 264 YAKRWHALGANIIGGCCGIGPKHIKAL 290
>UniRef50_Q2JJL4 Cluster: Methionine synthase; n=25;
Cyanobacteria|Rep: Methionine synthase - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 1224
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 288 GARLIGGCCRTTPADIAALKARTEGLSGLHRSL 386
G ++GGCC T P IAAL +GL RS+
Sbjct: 284 GVAVVGGCCGTRPEHIAALVEAVQGLRPKRRSI 316
>UniRef50_A6PRW5 Cluster: Methylenetetrahydrofolate reductase; n=1;
Victivallis vadensis ATCC BAA-548|Rep:
Methylenetetrahydrofolate reductase - Victivallis
vadensis ATCC BAA-548
Length = 595
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 98 ALGINCIA-LENTTAALQHLHGLTVLPLVVYPNSGE 202
A+G+NC E+T L+ L LT LP++V PN+G+
Sbjct: 190 AIGLNCGGGPESTLGVLEELTALTQLPVIVQPNAGQ 225
>UniRef50_A0VUF3 Cluster: Homocysteine S-methyltransferase; n=5;
Alphaproteobacteria|Rep: Homocysteine
S-methyltransferase - Dinoroseobacter shibae DFL 12
Length = 350
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 249 ARXADYLPQWQAAGARLIGGCCRTTPADIAAL 344
A A + W AAGA +GGCC PA I L
Sbjct: 295 AAYAAFAQAWVAAGATTVGGCCEIGPAHIEEL 326
>UniRef50_Q4Q793 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1498
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = -1
Query: 293 CASGLPLRQIIRXARNVHRDDARFCSRHRNARPSSDTPPAAAPLNR 156
C LP + V RD A R RPSS TPPAA P R
Sbjct: 599 CEVLLPHNAAVPMPPTVPRDGASLAPRQGRRRPSSATPPAAPPRQR 644
>UniRef50_Q30ZI4 Cluster: Vitamin B12-dependent methionine synthase
family protein; n=3; Desulfovibrio|Rep: Vitamin
B12-dependent methionine synthase family protein -
Desulfovibrio desulfuricans (strain G20)
Length = 841
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 285 AGARLIGGCCRTTPADIAAL 344
AG R +GGCC TTP IAAL
Sbjct: 294 AGVRCLGGCCGTTPDHIAAL 313
>UniRef50_Q1IQK2 Cluster: 5-methyltetrahydrofolate--homocysteine
S-methyltransferase; n=1; Acidobacteria bacterium
Ellin345|Rep: 5-methyltetrahydrofolate--homocysteine
S-methyltransferase - Acidobacteria bacterium (strain
Ellin345)
Length = 407
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 258 ADYLPQWQAAGA-RLIGGCCRTTPADIAALKARTEGL 365
A YL ++ AG + GGCC TP IAA+ EGL
Sbjct: 356 ARYLREFAEAGLINIAGGCCGNTPEHIAAIAKALEGL 392
>UniRef50_Q1IL23 Cluster: Methylenetetrahydrofolate reductase; n=2;
Acidobacteria|Rep: Methylenetetrahydrofolate reductase -
Acidobacteria bacterium (strain Ellin345)
Length = 617
Score = 33.9 bits (74), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKA 350
A Y ++ G L+GGCC TTP I ++K+
Sbjct: 257 ASYARKFVGVGVTLVGGCCGTTPDHIRSMKS 287
>UniRef50_A6DGP4 Cluster: 5-methyltetrahydrofolate--homocysteine
methyltransferase; n=1; Lentisphaera araneosa
HTCC2155|Rep: 5-methyltetrahydrofolate--homocysteine
methyltransferase - Lentisphaera araneosa HTCC2155
Length = 1204
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 252 RXADYLPQWQAA-GARLIGGCCRTTPADIAALKARTEG 362
+ +Y+ ++A G ++GGCC TTPA IA + G
Sbjct: 302 KMGEYMRDYEAENGINIVGGCCGTTPAHIAEITKHLGG 339
>UniRef50_A4E8K1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 849
Score = 33.9 bits (74), Expect = 2.8
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 282 AAGARLIGGCCRTTPADIAALK 347
A G ++GGCC TTPA +AAL+
Sbjct: 299 ADGVSVVGGCCGTTPAHMAALR 320
>UniRef50_A5DCB0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 313
Score = 33.9 bits (74), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 273 QWQAAGARLIGGCCRTTPADIAALKARTE 359
+W GA +IGGCC T P IA ++ + +
Sbjct: 281 EWLKIGASIIGGCCGTGPKQIAQIRFKVD 309
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +2
Query: 86 RRWLALGINCIALENTTAALQHL--HGLTVLPLVVYPN-SGEHYDA-VSKTW 229
+R +A+G NC L++ T L+++ + +P +VYPN +H D + + W
Sbjct: 224 KRLIAIGCNCTELKDATHVLKNIETYNYHNIPTIVYPNVFADHNDTKIDQKW 275
>UniRef50_Q3JMG8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 676
Score = 33.5 bits (73), Expect = 3.7
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 326 RRGATAPANQPCASGLPLR--QIIRXARNVHRDDARFCSRHRNARPSSD-TPPAAAPLNR 156
R GA PA CA G R + R R +R + R R +D +PPA APL R
Sbjct: 569 RGGALGPARARCALGAGRRSGRARRTRRRGYRTRSARARRAARLRRRADHSPPAPAPLGR 628
Query: 155 VNAATQR 135
+ A +R
Sbjct: 629 IRYAQRR 635
>UniRef50_Q0AAY4 Cluster: Putative uncharacterized protein; n=1;
Alkalilimnicola ehrlichei MLHE-1|Rep: Putative
uncharacterized protein - Alkalilimnicola ehrlichei
(strain MLHE-1)
Length = 263
Score = 33.5 bits (73), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 122 LENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHG 241
LE A +H +TV P +V P+ G A +TW HG
Sbjct: 34 LERLFAGTRHQEAITVSPCLVKPSPGSALLATPETWRDHG 73
>UniRef50_A4J6L9 Cluster: Homocysteine S-methyltransferase; n=1;
Desulfotomaculum reducens MI-1|Rep: Homocysteine
S-methyltransferase - Desulfotomaculum reducens MI-1
Length = 800
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAALKARTEGL 365
A+Y ++ GA ++GGCC TTP I A+ + + L
Sbjct: 254 AEYAQRFVDYGASILGGCCGTTPKHIQAIYQQVKKL 289
>UniRef50_O16386 Cluster: Putative uncharacterized protein K12B6.1;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein K12B6.1 - Caenorhabditis elegans
Length = 881
Score = 33.5 bits (73), Expect = 3.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 198 PEFGYTTSGSTVKPCKCCNAAVVFSSAIQLMPSASHLRITRQQ 70
P + +G+ +KP K N VVF + +QL+ HL T +Q
Sbjct: 475 PATDFMPAGTFIKPTKLTNWEVVFDNGVQLVDCIQHLTSTMRQ 517
>UniRef50_Q9KCE2 Cluster: Methylenetetrahydrofolate reductase; n=60;
Bacilli|Rep: Methylenetetrahydrofolate reductase -
Bacillus halodurans
Length = 618
Score = 33.1 bits (72), Expect = 4.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 288 GARLIGGCCRTTPADIAALKARTEGL 365
G RL+GGCC TTP + A +GL
Sbjct: 260 GVRLLGGCCGTTPEHVRAFAKVVKGL 285
>UniRef50_Q2BLG7 Cluster: Bacterial extracellular solute-binding
protein, family 3; n=1; Neptuniibacter caesariensis|Rep:
Bacterial extracellular solute-binding protein, family 3
- Neptuniibacter caesariensis
Length = 254
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 358 RVYRVYIVHCRPDKRXQSXIAXWRHKRLIRAYKTTKRYAASARTNMP 498
R+ Y++ C P KR S I + L AYKT++R A + N P
Sbjct: 51 RIDHPYVIECIPWKRALSSIKSGKVDALFSAYKTSEREAFAIYMNSP 97
>UniRef50_Q15S12 Cluster: Homocysteine S-methyltransferase; n=1;
Pseudoalteromonas atlantica T6c|Rep: Homocysteine
S-methyltransferase - Pseudoalteromonas atlantica
(strain T6c / BAA-1087)
Length = 304
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADIAAL--KARTEGL 365
A + W GA +IGGCC P I AL K ++EGL
Sbjct: 266 AAHAMHWVQNGASIIGGCCEIGPDHIKALHSKLQSEGL 303
>UniRef50_Q4FMM0 Cluster: Homocysteine S-methyltransferase; n=3;
Bacteria|Rep: Homocysteine S-methyltransferase -
Pelagibacter ubique
Length = 302
Score = 32.7 bits (71), Expect = 6.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 258 ADYLPQWQAAGARLIGGCCRTTPADI 335
A+++ +++ AGA ++GGCC T P+ I
Sbjct: 270 ANFVKKFKNAGATILGGCCETRPSHI 295
>UniRef50_O54095 Cluster: Putative oxidase; n=1; Streptomyces
coelicolor|Rep: Putative oxidase - Streptomyces
coelicolor
Length = 395
Score = 32.7 bits (71), Expect = 6.4
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -1
Query: 200 RPSSDTPPAAAPL----NRVNAATQRWCFPAQYS 111
RP++D PP AAP NR AT+RW P Y+
Sbjct: 117 RPTADLPPVAAPAEVTDNRKLYATKRWTRPVHYT 150
>UniRef50_A7CWS4 Cluster: Homocysteine S-methyltransferase
precursor; n=7; Bacteria|Rep: Homocysteine
S-methyltransferase precursor - Opitutaceae bacterium
TAV2
Length = 398
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 ARXADYLPQWQAAG-ARLIGGCCRTTPADIAALKARTEGL 365
A A L Q+ AG ++GGCC +TPA I A+ GL
Sbjct: 336 ADMARVLRQFAEAGLVNMVGGCCGSTPAHIKAIADAVRGL 375
>UniRef50_A6Q2F4 Cluster: 5-methyltetrahydrofolate--homocysteine
methyltransferase; n=2; Epsilonproteobacteria|Rep:
5-methyltetrahydrofolate--homocysteine methyltransferase
- Nitratiruptor sp. (strain SB155-2)
Length = 1148
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 288 GARLIGGCCRTTPADIAALKARTEG 362
G L+GGCC TTP I AL EG
Sbjct: 277 GVALLGGCCGTTPQHIKALVDAVEG 301
>UniRef50_A4TZ08 Cluster: Hydrolases of HD superfamily; n=1;
Magnetospirillum gryphiswaldense|Rep: Hydrolases of HD
superfamily - Magnetospirillum gryphiswaldense
Length = 204
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 10 FTLRDXNHLSDGTPLRDVVALLAGYPQVAGARH*LYCAGKH 132
FTL N +DG P+ DV LA P+ AGA Y +H
Sbjct: 25 FTLDLENPCADGMPISDVARSLAYQPRWAGATREFYSVAEH 65
>UniRef50_Q9VFR7 Cluster: CG14366-PA; n=1; Drosophila
melanogaster|Rep: CG14366-PA - Drosophila melanogaster
(Fruit fly)
Length = 776
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 116 IALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAXG 259
+A +N+ A +Q + L L+ P+SGE +V+ + +H GE+ G
Sbjct: 450 LAADNSEAMMQWVRALAAASLMQAPSSGESEPSVNSSLNHSGENSDSG 497
>UniRef50_Q7RZ57 Cluster: Predicted protein; n=2; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 376
Score = 32.7 bits (71), Expect = 6.4
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = -1
Query: 329 RRRGATAPANQPCA---SGLPLRQIIRXARNVHRDDARFCSRHRNARPSSDTPPAAAPLN 159
R + A P +Q C+ +GLPL +R + RD + S H + R S + AAA +
Sbjct: 62 RNKSADIPDDQNCSLYITGLPLNVTVRDIFDDIRDIGKVYSLHISPRSDSHSKAAAAVVF 121
Query: 158 RVNAATQRW 132
AA +R+
Sbjct: 122 FTRAAAERF 130
>UniRef50_A6S563 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 369
Score = 32.7 bits (71), Expect = 6.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 297 LIGGCCRTTPADIAALKARTEGL 365
++GGCC+TTP +I L+ R + L
Sbjct: 344 IVGGCCKTTPREIGKLRERIDRL 366
>UniRef50_Q98194 Cluster: MC026L; n=2; Molluscum contagiosum virus
subtype 1|Rep: MC026L - Molluscum contagiosum virus
subtype 1 (MOCV) (MCVI)
Length = 83
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Frame = -2
Query: 484 WRMRH--NVLWFCRPG*GACAAXRQCXIGCAY------QAYNERCRPDKPSV 353
W++R+ N+ + CR G G QC I CA+ Y+E C P + V
Sbjct: 14 WQVRNCDNICYICRRGLGKGCLRPQCEIDCAFCLPVCGHGYHEHCLPPRTEV 65
>UniRef50_Q8DJI3 Cluster: Tlr1240 protein; n=1; Synechococcus
elongatus|Rep: Tlr1240 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 490
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 77 RVIRRWLALGINCIALENTTAALQHLHGLT-VLPLVVYP 190
R++ R L L C+ + A LQH +GL+ +LPL++YP
Sbjct: 30 RLVARALRLRRGCLLQVSQRAVLQHRYGLSYLLPLLLYP 68
>UniRef50_Q93A68 Cluster: Methylenetetrahydrofolate reductase; n=2;
Bacteria|Rep: Methylenetetrahydrofolate reductase -
uncultured bacterium
Length = 612
Score = 32.3 bits (70), Expect = 8.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 285 AGARLIGGCCRTTPADIAAL 344
AGA+++GGCC TTP I A+
Sbjct: 269 AGAQIVGGCCGTTPDHIRAV 288
>UniRef50_A5ZUF2 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 289
Score = 32.3 bits (70), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 231 IITVNIARXADYLPQWQAAGARLIGGCCRTTPADIAAL 344
+ ++N A ++ GA ++GGCC TTP+ I AL
Sbjct: 247 VYSMNAEEFAHHMKVLIENGASVVGGCCGTTPSFIKAL 284
>UniRef50_A5NMD1 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 509
Score = 32.3 bits (70), Expect = 8.5
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -1
Query: 305 ANQPCASGLPLRQIIRXARNVHRDDARFCSRHRNARPSSDTPPAAAPLNRVNAATQR 135
A A+G P R + A ++ R R ++ RNARP+ PA AP + A ++R
Sbjct: 26 ARPAVAAGRPARSV---ASHLQRCGVRLTNQERNARPARPKAPAHAPRGSLLARSRR 79
>UniRef50_A1SWN6 Cluster: Homocysteine S-methyltransferase; n=2;
Gammaproteobacteria|Rep: Homocysteine
S-methyltransferase - Psychromonas ingrahamii (strain
37)
Length = 310
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 276 WQAAGARLIGGCCRTTPADIAAL 344
W AGA +IGGCC +PA I L
Sbjct: 284 WINAGASIIGGCCGVSPAHIKKL 306
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,495,155
Number of Sequences: 1657284
Number of extensions: 12834824
Number of successful extensions: 41552
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 39209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41528
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -