Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0637.Seq
         (907 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.59 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   3.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 287  GGMTLFTKKKSRLQAAGEYVSGSRSRT 207
            GG    ++ +SR Q+AG   SGSRSR+
Sbjct: 1124 GGSRSRSRSRSRSQSAGSRKSGSRSRS 1150


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 390 NYSLSNSFTLSDHMV 434
           N+ +SN++TLSDH V
Sbjct: 183 NWRVSNAYTLSDHRV 197


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 295 ATMGSLYQEHHDEDFFLYIAFSDEN 369
           AT  ++     D+DFF  I+FSD++
Sbjct: 290 ATASAILDTLGDDDFFNLISFSDQS 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 890,420
Number of Sequences: 2352
Number of extensions: 18457
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)