Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0637.Seq
(907 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to autop... 101 9e-22
At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to autop... 101 9e-22
At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to autop... 101 9e-22
At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to autop... 99 5e-21
At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to autop... 99 5e-21
At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to autop... 97 1e-20
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 92 5e-19
At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to autop... 89 4e-18
At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to autop... 87 1e-17
At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to autop... 87 1e-17
At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to autop... 76 4e-14
At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to autop... 73 2e-13
At5g06680.1 68418.m00754 tubulin family protein similar to SP|Q9... 30 1.8
At1g02570.1 68414.m00208 expressed protein 29 4.2
At3g01015.1 68416.m00001 expressed protein ; expression supporte... 29 5.6
At5g03140.1 68418.m00262 lectin protein kinase family protein co... 28 7.4
>At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 101 bits (241), Expect = 9e-22
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 35 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFY 214
K +K+EH EKR+AE +IR KYPDR+PVIVEKA K + +DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFV 62
Query: 215 FLIRKRIHLRPE 250
++IRKRI L E
Sbjct: 63 YVIRKRIKLSAE 74
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+A + +F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 72 SAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 101 bits (241), Expect = 9e-22
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 35 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFY 214
K +K+EH EKR+AE +IR KYPDR+PVIVEKA K + +DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFV 62
Query: 215 FLIRKRIHLRPE 250
++IRKRI L E
Sbjct: 63 YVIRKRIKLSAE 74
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+A + +F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 72 SAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to
autophagy 8d [Arabidopsis thaliana] GI:19912157;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 120
Score = 101 bits (241), Expect = 9e-22
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+K EH EKR+AE +IR KYPDR+PVIVE+A K + D+D+KKYLVP+DLTVGQF +++
Sbjct: 6 FKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVV 65
Query: 224 RKRIHLRPE 250
RKRI L PE
Sbjct: 66 RKRIKLSPE 74
Score = 60.9 bits (141), Expect = 1e-09
Identities = 22/43 (51%), Positives = 34/43 (79%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+ +F FV N++PPT+A M ++Y+EH DED FLY+++S EN +G
Sbjct: 75 KAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117
>At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+K + FEKRKAE +IR KYPDR+PVIVEKA K + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 224 RKRIHLRPE 250
RKRI L E
Sbjct: 67 RKRIKLSAE 75
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+A + +F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 73 SAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+K + FEKRKAE +IR KYPDR+PVIVEKA K + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 224 RKRIHLRPE 250
RKRI L E
Sbjct: 67 RKRIKLSAE 75
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+A + +F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 73 SAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to
autophagy 8g [Arabidopsis thaliana] GI:19912163;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912162|dbj|AB073181.1|
Length = 121
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
++++H FEKRKAE +IR KY DRVPVIVEK+ K + ++DKKKYLVP+DLTVGQF ++I
Sbjct: 6 FRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVI 65
Query: 224 RKRIHLRPE 250
RKRI L E
Sbjct: 66 RKRIQLSAE 74
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 381
+A + +F FV+NV+PPT A M ++Y E+ +ED FLY+ +S EN +G+
Sbjct: 72 SAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+K EH E+R+ E +IR KYPDR+PVIVE+A + + ++DKKKYLVP+DLTVGQF +++
Sbjct: 6 FKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVV 65
Query: 224 RKRIHLRPE 250
RKRI L E
Sbjct: 66 RKRIKLSAE 74
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +1
Query: 241 AA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+A + +F FV N +PPT+A M ++Y E+ DED FLY+ +S EN +G
Sbjct: 72 SAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
>At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to
autophagy 8a [Arabidopsis thaliana] GI:19912151;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 35 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFY 214
K +K + E R +E +IR KYPDR+PVIVEKA + + D+DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFV 62
Query: 215 FLIRKRIHLRPE 250
+++RKRI L E
Sbjct: 63 YVVRKRIKLGAE 74
Score = 59.3 bits (137), Expect = 3e-09
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 381
+ +F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G+
Sbjct: 75 KAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
>At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 35 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFY 214
K +K + E R AE +IR KYP+RVPVIVEKA + + D+DKKKYLVP+DLT+GQF
Sbjct: 3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFV 62
Query: 215 FLIRKRIHLRPE 250
+++RKRI L E
Sbjct: 63 YVVRKRIKLGAE 74
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 387
+ +F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 75 KAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 35 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFY 214
K +K + E R AE +IR KYP+RVPVIVEKA + + D+DKKKYLVP+DLT+GQF
Sbjct: 3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFV 62
Query: 215 FLIRKRIHLRPE 250
+++RKRI L E
Sbjct: 63 YVVRKRIKLGAE 74
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 387
+ +F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 75 KAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to
autophagy 8i [Arabidopsis thaliana] GI:19912167;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|21636957|gb|AF492760.1|
Length = 115
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/68 (47%), Positives = 49/68 (72%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+KE+++ ++R AE +I KYP R+PVI EK K L ++KKK+LVP D++VGQF +++
Sbjct: 4 FKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYIL 63
Query: 224 RKRIHLRP 247
R+HL P
Sbjct: 64 SARLHLSP 71
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+ LF FVNN +P T+A M S+Y+ + D+D F+Y+ +S E +G
Sbjct: 73 KALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to
autophagy 8h [Arabidopsis thaliana] GI:19912165;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912164|dbj|AB073182.1|
Length = 119
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +2
Query: 44 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKVALGDLDKKKYLVPSDLTVGQFYFLI 223
+K++ S ++R E I KYPDR+PVI+EK L D++K KYLVP D+TVG F ++
Sbjct: 8 FKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHML 67
Query: 224 RKRIHLRP 247
KR+ L P
Sbjct: 68 SKRMQLDP 75
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 250 RRLFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 378
+ LF FV+N +P T++ M SLY +ED FLY+ +S E +G
Sbjct: 77 KALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
>At5g06680.1 68418.m00754 tubulin family protein similar to
SP|Q96CW5 Gamma-tubulin complex component 3 {Homo
sapiens}
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 372 LWKLI-PNYSLSNSFTLSDHMVKFNLSLRLKLCIILW 479
+WK + PN SNSF VK L L+ C +LW
Sbjct: 622 IWKTMKPNCITSNSFVKLQSSVKLQLLSALRRCQVLW 658
>At1g02570.1 68414.m00208 expressed protein
Length = 431
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 453 RLKLCIILWYFFIINWHIIYICLHMNSIKLFKQVKDCFVFT 575
RL L I L +NW + YIC+ + +K+FK D FV T
Sbjct: 366 RLNLPIRLEGLNFVNWCMYYICVGIGLMKIFKGFLD-FVNT 405
>At3g01015.1 68416.m00001 expressed protein ; expression supported
by MPSS
Length = 488
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 26 INMKFQYKEEHSFEKRKAEGEKIRRKYPDRVP 121
IN+ QYK E +++ AE E+IRR + VP
Sbjct: 396 INLVEQYKTERERQQKLAEEEEIRRLRKELVP 427
>At5g03140.1 68418.m00262 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 711
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 205 PVLLLDPETYSPAA*RRLFFFVNNVIPPTSATMGSLYQEHHDEDFF----LYIAFSDENV 372
PV PET SPA+ F F + P+S G + DED+ ++ ++E
Sbjct: 81 PVKFRHPETKSPASFTTYFSFSVTNLNPSSIGGGLAFVISPDEDYLGSTGGFLGLTEETG 140
Query: 373 YGN*FQIIHFQIVL 414
G+ F + F ++
Sbjct: 141 SGSGFVAVEFDTLM 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,543,582
Number of Sequences: 28952
Number of extensions: 401681
Number of successful extensions: 1048
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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