Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0632.Seq
(387 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 34 0.045
01_01_0613 - 4571689-4572348 30 0.74
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 1.7
07_01_0013 - 99952-100413,100534-100704 28 2.2
01_06_1105 - 34559694-34559852,34560298-34560312,34560451-345605... 28 2.2
05_03_0458 + 14280953-14281866,14281964-14282912 28 3.0
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 3.9
03_01_0643 - 4708245-4708355,4708456-4708800,4709124-4709700,470... 27 5.2
03_01_0477 + 3662999-3663356,3664012-3664111,3664204-3664324,366... 27 5.2
01_01_0157 + 1367891-1367950,1368147-1368272,1372590-1373138 27 5.2
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 27 6.9
04_04_0929 - 29474540-29475247,29475485-29475850,29476032-294760... 27 6.9
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 27 6.9
11_03_0190 - 11350497-11350832,11351926-11352303,11353897-113541... 26 9.1
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 26 9.1
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 26 9.1
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 26 9.1
>03_05_1065 +
30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 33.9 bits (74), Expect = 0.045
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 362 LAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADI 183
LA + GH R+ + D + S G + D + + +VSA + LC + H AP +
Sbjct: 378 LATTSSGHRRFGMEDEIEEELSLAGIFNKGDRSYAVRRAAVSAYAALCAVLCAHEAPGGL 437
Query: 182 IDR 174
DR
Sbjct: 438 PDR 440
>01_01_0613 - 4571689-4572348
Length = 219
Score = 29.9 bits (64), Expect = 0.74
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 353 LALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIID 177
L LGH YSL PP S + D GV +++S +AT+ +G + R+ +++D
Sbjct: 51 LELGHSVYSLPLPPPPSQPVVVAGGNNDQYGVSSSSSAAATT--SRIGFRTRSEVEVLD 107
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 228 TTLHAWNETPCARRYY 181
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 275 PDHAGVLT-ATSVSATSPLCTLGTKHRAPADIIDRAP 168
P H G LT A SV TS L T GT H+A A +D+ P
Sbjct: 155 PSHVGYLTLAKSVVETSDLAT-GTLHQATA-ALDQQP 189
>01_06_1105 -
34559694-34559852,34560298-34560312,34560451-34560522,
34560695-34561549
Length = 366
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 317 VPPQSNSPPGSVLEPDHA-GVLTATSVSATSPLCTLGTKHRAPADIIDR 174
VP N PG++LEP ++ G ++ + S T G K D+ D+
Sbjct: 213 VPQPLNVGPGAILEPSYSDGQTSSGMIGGMSDSQTPGRKRGMSGDVADK 261
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = -2
Query: 314 PPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVS 147
PP SNS P S P LT TS ++SP P PLPP +S
Sbjct: 33 PPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTP----PPLPPTTLS 84
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 3.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 350 ALGHLRYSLTDVPPQSNSPPGSVLEP 273
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
>03_01_0643 -
4708245-4708355,4708456-4708800,4709124-4709700,
4709780-4710462,4710618-4710980,4712199-4712530,
4712856-4713048,4713748-4713790,4713964-4714052,
4714186-4714301,4714816-4714935,4715538-4715577
Length = 1003
Score = 27.1 bits (57), Expect = 5.2
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = -2
Query: 386 FAPREVSVLAELALGHLRYSLTDVPPQ--SNSPPGSVLEPD-HAGVLTATSVSA-TSPLC 219
F RE +V+A +ALG ++TD P S S P + + H G+ + S+ TS L
Sbjct: 657 FCGRERTVVALIALGAAPGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQ 716
Query: 218 TLGTKHRAPADIIDRAPLP 162
TL K + + + LP
Sbjct: 717 TLNLKEAMRSSAGEISGLP 735
>03_01_0477 +
3662999-3663356,3664012-3664111,3664204-3664324,
3664468-3664563,3664669-3664791
Length = 265
Score = 27.1 bits (57), Expect = 5.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 326 LTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHR--APADIIDRAPLPPNR 153
L + P + P AG LT++ +S PL L HR A R P PP+R
Sbjct: 5 LPSLSPPPHQAPVPAATTALAGNLTSSLLSLPPPLPRLAVSHRRAVVAAASSRPPPPPSR 64
>01_01_0157 + 1367891-1367950,1368147-1368272,1372590-1373138
Length = 244
Score = 27.1 bits (57), Expect = 5.2
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Frame = -1
Query: 318 CTAPVKLPAWQ--------CPRTGSRGSFNGDERFRHVTTLHAWNETPCARRYYRPRTAS 163
C P K P +Q CP +G S + ++H TT H W T +YY P
Sbjct: 52 CFEPFKPPIFQACSYEPCFCPDSGCGFSGSVATLWKHFTTQHKWPSTEF--KYYTPFDLR 109
Query: 162 AQP 154
+P
Sbjct: 110 VKP 112
>06_02_0200 -
12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 317 VPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGT 207
+PP S SP S L HA +T+ +SP C L +
Sbjct: 44 LPPPSPSPRPSSLLCAHAAAITSLCPLPSSPPCLLAS 80
>04_04_0929 -
29474540-29475247,29475485-29475850,29476032-29476093,
29476191-29476302,29476401-29476529,29476724-29476738
Length = 463
Score = 26.6 bits (56), Expect = 6.9
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -2
Query: 383 APREVSVLAELALGHLRY-SLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGT 207
A + V L +L L+ SL D Q N P SVL T S S SP T+
Sbjct: 148 ASKNVPALKQLEKPQLQVQSLYD---QDNGSPTSVLTVPQIRADTLGSESGGSPTSTIDI 204
Query: 206 KHRAPADIIDRAPL 165
+ R P I A L
Sbjct: 205 EERCPTPSIATAEL 218
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 26.6 bits (56), Expect = 6.9
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = -2
Query: 335 RYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPN 156
R +LT P PP S P+ T ++ SP T + +PA P+ P
Sbjct: 140 RQALTPAPSLVTHPPHSPSTPEKTQAATPSATQPPSPAVTEDGRTNSPATPNRIIPVTPR 199
Query: 155 RVSNET 138
+ T
Sbjct: 200 PGKHST 205
>11_03_0190 -
11350497-11350832,11351926-11352303,11353897-11354181,
11354515-11355327
Length = 603
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 356 ELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSP 225
E A+G + D+PP S++PP S E H L S++ P
Sbjct: 134 EAAMGLADWFGKDLPPSSSAPP-SPFEEVHGAALFDESMANLDP 176
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 217 VQSGDVAETLVAVKTPA*SGSRTLPGGEF 303
++ GDV E+L ++K A + T+ GEF
Sbjct: 377 IKGGDVLESLASIKVAAFDKTGTITRGEF 405
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -3
Query: 79 PLMSPYNARLESSSTGSSFPADSPKP 2
PL+ P AR SSTGSSFP S P
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPP 71
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 97 SPTYATPLMSPYNARLESSSTGSSFPADSPK 5
SP Y P ++ N + S +T S P PK
Sbjct: 159 SPKYVKPAVAKQNGEVVSRATKSDAPVSKPK 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,345,113
Number of Sequences: 37544
Number of extensions: 238498
Number of successful extensions: 908
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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