Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0632.Seq
         (387 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   0.73 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   0.97 
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    25   1.3  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   3.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   6.8  
AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450 pr...    22   6.8  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    22   9.0  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 317 VPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLG 210
           +PP SNS P S   PD      A++ S++S L   G
Sbjct: 868 MPPSSNSSPSSYPSPDVVISGLASNNSSSSNLVAAG 903


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 314 PPQSNSPPGSVLEPDHAGVLTATS--VSATSPLCTLGTKHRAPAD 186
           PP  N PPGS   P  +   T TS  + A+S + T  +   A  D
Sbjct: 5   PPGVNRPPGSHRPPGLSNPPTCTSAKMMASSGMSTRASARSASVD 49


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 226 GDVAETLVAVKTPA*SGSRTLPGGEFDWGGTSVKE 330
           GD  ++++   T A +  R   GG F  GGT +K+
Sbjct: 10  GDEIQSVLGELTGARTVPRVFIGGNFVGGGTDIKK 44


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 96  DRFARSSLKNHYFHCFITYSVGRKRC 173
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 SSLKNHYFHCFITYSVGRK 167
           SS    +FHC+     GRK
Sbjct: 403 SSFFQQFFHCYCPVKFGRK 421


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = +2

Query: 191 RAHGV-SFQACRVVTWRKRSSPLKLPRDPVRGHCQAGSLTGAVHLSKNNA 337
           R H V  F + +    RKR  PLK   D      Q  S    V    NNA
Sbjct: 142 RLHSVVEFSSAKPSDPRKRVRPLKKQLDLEAAWMQPSSTISLVERYDNNA 191


>AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450
           protein.
          Length = 89

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 96  DRFARSSLKNHYFHCFITYSVGRKRC 173
           D F      + + +CF+ +S G + C
Sbjct: 34  DNFLPERTAHRHPYCFLPFSAGPRNC 59


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 305 SNSPPGSVLEPDHAGVL 255
           SN P G + EPD  G L
Sbjct: 144 SNEPWGELTEPDTVGYL 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,367
Number of Sequences: 2352
Number of extensions: 7669
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)