Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0632.Seq
         (387 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.     35   0.11 
AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.    31   0.98 
BC032500-1|AAH32500.1|  247|Homo sapiens CMAH protein protein.         29   4.0  
AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    29   4.0  
BC128208-1|AAI28209.1|  368|Homo sapiens PLCH2 protein protein.        28   9.1  
BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and homeob...    28   9.1  
AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZH...    28   9.1  
AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.     28   9.1  

>AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.
          Length = 235

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = -2

Query: 305 SNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVV 126
           S+  PGS  +P HA V TA + + + P    G     P +++ R    P+  S  T    
Sbjct: 50  SSHTPGS-RQPGHASVPTARARTLSPPQHRCGFACLGPREVVGRTSGHPSMQS--TPGFT 106

Query: 125 VFQRRSRETISHLCYTSHVSL 63
               R RET S LC+  H +L
Sbjct: 107 FGNLRVRETSSRLCHKLHQNL 127


>AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.
          Length = 1056

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = -2

Query: 368 SVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPA 189
           S LA  ++G L  S +  P    +  GSVL P   G++   S    SP  TLG  + AP 
Sbjct: 116 SSLAPTSVGQLVMSASAGPKPPPATTGSVLAPTSLGLVMPASAGPRSPPVTLG-PNLAPT 174

Query: 188 DIIDRAPLPPNRV 150
              D+   PP  V
Sbjct: 175 S-RDQKQEPPASV 186


>BC032500-1|AAH32500.1|  247|Homo sapiens CMAH protein protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 282 PRTGSRGSFNGDERFRHVTTLHAWNETPCARRYYR 178
           P T S G F G+  +   T  HAW+   C +  Y+
Sbjct: 211 PMTFSGGKFTGNILYESDTKYHAWHIAKCCKSKYK 245


>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 275 PDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR 153
           P  A  + A S+ A +P C L   HR    + D   LPP+R
Sbjct: 146 PTPALWVDAPSLPAQAPWCLLSPGHRGATSLPDTMMLPPSR 186


>BC128208-1|AAI28209.1|  368|Homo sapiens PLCH2 protein protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -2

Query: 305 SNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRV 150
           + SP G +  P+H  V    +     PLC+L T    PA      P PP  V
Sbjct: 194 TRSPAGDIFNPEHHHVHQDMTQRPLPPLCSLETIAEEPAP--GPGPPPPAAV 243


>BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and
           homeoboxes 2 protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = -2

Query: 347 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAP 168
           LG     LT V   S +   S +    AGV   T+     PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGV---TNHGQKRPLVTPQAAPEPKRPHIAQVP 427

Query: 167 LPPNRVSNETMKVVVFQRRSRETISHL 87
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZHX2
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = -2

Query: 347 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAP 168
           LG     LT V   S +   S +    AGV   T+     PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGV---TNHGQKRPLVTPQAAPEPKRPHIAQVP 427

Query: 167 LPPNRVSNETMKVVVFQRRSRETISHL 87
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.
          Length = 868

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = -2

Query: 347 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAP 168
           LG     LT V   S +   S +    AGV   T+     PL T           I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGV---TNHGQKRPLVTPQAAPEPKRPHIAQVP 458

Query: 167 LPPNRVSNETMKVVVFQRRSRETISHL 87
            PP +V+N  +     +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,568,531
Number of Sequences: 237096
Number of extensions: 1293043
Number of successful extensions: 3649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3649
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)