Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0632.Seq
         (387 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical pr...    29   0.86 
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   1.1  
AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical ...    28   2.0  
Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z81044-1|CAB02810.1|  223|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81048-9|CAI79126.1|  560|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z81048-8|CAB51463.1|  602|Caenorhabditis elegans Hypothetical pr...    26   8.1  
U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical ...    26   8.1  
AF039570-1|AAC00000.1|  602|Caenorhabditis elegans aryl hydrocar...    26   8.1  

>Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical
           protein C14B1.9 protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 0.86
 Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
 Frame = -2

Query: 380 PREVSVLAELALGHLRYSLTDVPPQSNSPPGSVL-EPDHAGVLTATSVSATSPLCTLGTK 204
           P+++S+    ++G    +  ++P Q NSP  +V  E D    L A S + ++       K
Sbjct: 252 PKKISLDKPKSVGSPSNAHNEIPSQKNSPKSAVKNETDTEDALMAKSGNLSTAAVMFKNK 311

Query: 203 -HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETIS 93
            H      +D    P N    ET+  ++ +   ++ ++
Sbjct: 312 VHTLQCQFLDSHGNPQNTPDFETLSKILSEHFDKKELT 349


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 121  FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 2
            F DD  K     ++   S  +   ESSSTGSS  +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 121  FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 2
            F DD  K     ++   S  +   ESSSTGSS  +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468


>AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical
           protein ZC190.4 protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = -2

Query: 215 LGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCY 81
           +GT+ +   DIID   +P N +S++ +  +++  R  ET++H+ +
Sbjct: 287 VGTR-KTSTDIIDGFNVPSNMISDDNLPALIY--RVIETLNHMIF 328


>Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical
           protein F13D12.4a protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -1

Query: 309 PVKLPAWQCPRTGSRGSFNGDERFRHVTTLHAWNETPCARRYYRPRTASAQP 154
           PV LP +    TGSRGSF GD  F     +  + +     +Y+       +P
Sbjct: 466 PVPLPMFSF--TGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNESLTELKP 515


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -3

Query: 118 SDDRAKRSPTYATP----LMSPYNARLESSSTGSSFPAD-SPKP 2
           +DD   R P + +     L  PY +   SSS+ SS P+D +P+P
Sbjct: 681 NDDSDSRFPAFKSSSVAMLTEPYKSSSSSSSSTSSIPSDPAPRP 724


>Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical
           protein C05B5.2 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 124 FFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPK 5
           F+S+  A RS +   P+MS     + +++T +  PA S K
Sbjct: 46  FYSNITAPRSTSVLAPVMSSLEVYINTTTTSAFAPAQSIK 85


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 254 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 138
           T+ +   TSP  T+GT   APA++      P N  S+ T
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 661


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 254 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 138
           T+ +   TSP  T+GT   APA++      P N  S+ T
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 717


>Z81044-1|CAB02810.1|  223|Caenorhabditis elegans Hypothetical
           protein C30H6.1 protein.
          Length = 223

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 317 VPPQSNSPPGSVLEPDHAGVLTATSV 240
           +PP SNS  GS+ +   AG++ A ++
Sbjct: 69  IPPTSNSKSGSLADSGQAGLVLADAI 94


>Z81048-9|CAI79126.1|  560|Caenorhabditis elegans Hypothetical
           protein C41G7.5b protein.
          Length = 560

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 341 HLRYSLTDVPPQSNSPPGSVLEPD 270
           H  Y LT  PP    PPG+V  PD
Sbjct: 461 HDVYHLTQYPPTYPHPPGTVGYPD 484


>Z81048-8|CAB51463.1|  602|Caenorhabditis elegans Hypothetical
           protein C41G7.5a protein.
          Length = 602

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 341 HLRYSLTDVPPQSNSPPGSVLEPD 270
           H  Y LT  PP    PPG+V  PD
Sbjct: 503 HDVYHLTQYPPTYPHPPGTVGYPD 526


>U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical
           protein B0432.7 protein.
          Length = 621

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +3

Query: 57  AL*GDMRGVA*VGDRFARSSLKNHYFHCFITYSVGRKRCAVDNIGGRTVF 206
           AL G +R VA + DR  R SLKN     F+TY+      +  NI  R+ F
Sbjct: 58  ALNGMIRYVADM-DRATRLSLKNQQLKEFLTYTPVILNASTTNIVTRSKF 106


>AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical
           protein W02F12.3 protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -2

Query: 320 DVPPQSNSPPGSVLEPDHAGVLTATSVSATSP 225
           DVP  S +PPGS   P  AG   A  + AT P
Sbjct: 48  DVPSTSGAPPGSSSAPTPAGNQVA-PMPATRP 78


>AF039570-1|AAC00000.1|  602|Caenorhabditis elegans aryl hydrocarbon
           receptor orthologAHR-1 protein.
          Length = 602

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 341 HLRYSLTDVPPQSNSPPGSVLEPD 270
           H  Y LT  PP    PPG+V  PD
Sbjct: 503 HDVYHLTQYPPTYPHPPGTVGYPD 526


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,051,162
Number of Sequences: 27780
Number of extensions: 182045
Number of successful extensions: 627
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)