Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0629.Seq
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 45 0.003
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 43 0.009
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 41 0.036
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 41 0.048
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 40 0.063
UniRef50_Q6ZCW6 Cluster: Putative uncharacterized protein P0028A... 36 1.4
UniRef50_UPI0001553888 Cluster: PREDICTED: similar to mKIAA1116 ... 34 4.2
UniRef50_Q00V40 Cluster: OSJNBa0088H09.13 [Oryza sativa; n=2; Os... 33 7.3
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +1
Query: 256 PPTKNGHAXPPTESRKSC*SVNP 324
PPTKNGHA PPT+SRKS SVNP
Sbjct: 91 PPTKNGHAPPPTKSRKSSQSVNP 113
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 275 MHXHPPNQERAVNLSILPVSGPAIPSPDIELSYIRT 382
MH HP N+ERA+NLSIL VSGP + L ++ T
Sbjct: 1 MHHHPQNRERAINLSILSVSGPGPRKSPVLLFFVTT 36
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 41.1 bits (92), Expect = 0.036
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 275 MHXHPPNQERAVNLSILPVSGP 340
MH HP N+ERA+NLSIL VSGP
Sbjct: 1 MHHHPQNRERAINLSILSVSGP 22
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 40.7 bits (91), Expect = 0.048
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 254 VHQLRTAMHXHPPNQERAVNL 316
+H+L+TAMH HP NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 40.3 bits (90), Expect = 0.063
Identities = 33/69 (47%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 266 LVGGRFVWLIPVTNETLAC*IGVVI*VCAASCRATH*RRIKILLRG-TGVFEPHEIEQ*Q 90
LV G FVWLIP+TNETL C G+V T LLRG TG + Q Q
Sbjct: 2 LVEG-FVWLIPITNETLTC--GLV----------TPFLNGGRLLRGTTGSEASGSLRQLQ 48
Query: 89 VCDAXRCPG 63
VCDA RC G
Sbjct: 49 VCDALRCSG 57
>UniRef50_Q6ZCW6 Cluster: Putative uncharacterized protein
P0028A08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0028A08.6 - Oryza sativa subsp. japonica (Rice)
Length = 337
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +3
Query: 462 LGFECETRLVKSHCLDLPTLGAPQWSISLPDSARLASGLRGRSXIIPRMGSFRXQRPLRR 641
LG C R VK+H +LP + +P A G R PR+ S + RP RR
Sbjct: 65 LGASCGLRAVKAHGAELPD------GLLVPPGATGGQGEVRRGRPTPRVDSRKSSRPWRR 118
Query: 642 VHETKWS 662
T+WS
Sbjct: 119 PSPTRWS 125
>UniRef50_UPI0001553888 Cluster: PREDICTED: similar to mKIAA1116
protein isoform 1; n=1; Mus musculus|Rep: PREDICTED:
similar to mKIAA1116 protein isoform 1 - Mus musculus
Length = 1494
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -1
Query: 607 IRGIMXERPLRPEASLAESGKDMLHCGAPRVGRSKQCD 494
IRGI +PLRP A+LA + +D G PRV RS++ D
Sbjct: 7 IRGIGHPKPLRPAAALAPAARDEDSQG-PRVPRSRRSD 43
>UniRef50_Q00V40 Cluster: OSJNBa0088H09.13 [Oryza sativa; n=2;
Ostreococcus|Rep: OSJNBa0088H09.13 [Oryza sativa -
Ostreococcus tauri
Length = 566
Score = 33.5 bits (73), Expect = 7.3
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = -1
Query: 652 VSCTRRSGRWXRKLPIRGIMXERPLRPEASLAESGKD-MLHCGAPRVGRSKQCDFTSRVS 476
++C R+ W R R + P P ++ + ++ HC RV R K +RV
Sbjct: 114 LNCPARAQAW-RNASAR-LPCASPRPPSLAIRRNTRERQRHCTVRRVARKKHPSTLARVR 171
Query: 475 HSKPRRDVEAHLDRGDRCYRFFS*HVHHGS 386
++PR V AHL RF HH S
Sbjct: 172 STRPRAPVAAHLRVRVARSRFAPPLEHHPS 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,452,408
Number of Sequences: 1657284
Number of extensions: 17752445
Number of successful extensions: 36672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36666
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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