Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0629.Seq
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.        31   4.2  
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.                31   4.2  
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.     31   4.2  
AY358179-1|AAQ88546.1|  108|Homo sapiens GSQS6193 protein.             31   5.5  

>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
          Length = 1481

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = -3

Query: 614 ATHPRDYA*TPSKARSQPSRIRQGYAPLWSPESREV*TM*LY*SRFAFKTETRRRSPFGS 435
           A++ +DY  +PS  RS  S     Y       SR       Y    A+++ TR  SP+  
Sbjct: 240 ASYGQDYDLSPS--RSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSR 297

Query: 434 RRSMLSVFFLTRASRLRRSGYNSVR 360
           R+  +S +   R+S   RSG  S R
Sbjct: 298 RQRSVSPYSRRRSSSYERSGSYSGR 322


>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
          Length = 1490

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = -3

Query: 614 ATHPRDYA*TPSKARSQPSRIRQGYAPLWSPESREV*TM*LY*SRFAFKTETRRRSPFGS 435
           A++ +DY  +PS  RS  S     Y       SR       Y    A+++ TR  SP+  
Sbjct: 240 ASYGQDYDLSPS--RSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSR 297

Query: 434 RRSMLSVFFLTRASRLRRSGYNSVR 360
           R+  +S +   R+S   RSG  S R
Sbjct: 298 RQRSVSPYSRRRSSSYERSGSYSGR 322


>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
          Length = 1535

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = -3

Query: 614 ATHPRDYA*TPSKARSQPSRIRQGYAPLWSPESREV*TM*LY*SRFAFKTETRRRSPFGS 435
           A++ +DY  +PS  RS  S     Y       SR       Y    A+++ TR  SP+  
Sbjct: 294 ASYGQDYDLSPS--RSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSR 351

Query: 434 RRSMLSVFFLTRASRLRRSGYNSVR 360
           R+  +S +   R+S   RSG  S R
Sbjct: 352 RQRSVSPYSRRRSSSYERSGSYSGR 376


>AY358179-1|AAQ88546.1|  108|Homo sapiens GSQS6193 protein.
          Length = 108

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -2

Query: 354 GLGIAGPDTGRIDRLTALS*FGGWXCMA--VLSWWTICLVNSGNERDSSLLNRRRYLGVR 181
           GLG     TGR+DR  A      W   +    SWW+IC    G    S  L R+R L  R
Sbjct: 34  GLGAGELGTGRLDRTQAPPSLKAWPLGSGPPSSWWSICPPQRGKTARS--LERKRILESR 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,887,813
Number of Sequences: 237096
Number of extensions: 2814285
Number of successful extensions: 8478
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8478
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)