Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0629.Seq
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    29   6.4  
AY069428-1|AAL39573.1|  844|Drosophila melanogaster LD13864p pro...    29   6.4  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    29   6.4  
AE013599-91|AAF57324.2|  844|Drosophila melanogaster CG8426-PA p...    29   6.4  

>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 624  GCESYPSAGLCXNAL*GPKPA*PNPARICSTVEPRESGGLNNVTLLVAFRI---QNRDAT 454
            G   Y SAGL  + L GP P  P P  + S   P+++G  N + + +A+ I   QN+ + 
Sbjct: 1867 GYSGYTSAGLLHSGLGGPTPFMP-PNHLTS-FAPKKTGRWNAMHVRIAWEIYYHQNKQSP 1924

Query: 453  SK 448
             K
Sbjct: 1925 EK 1926


>AY069428-1|AAL39573.1|  844|Drosophila melanogaster LD13864p
           protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/79 (24%), Positives = 38/79 (48%)
 Frame = +1

Query: 244 QTNRPPTKNGHAXPPTESRKSC*SVNPSGVRACYSEPRHRTELYPDLRSRDARVKKKTDS 423
           QTN P  +NG     + +  SC  V+   ++    +  +R+ + P+  +     +++T S
Sbjct: 542 QTNSPHIQNGLPVSDSTNDNSCNVVDTISLKTMAQDAINRSAIDPNSLN-----QQQTSS 596

Query: 424 IDLRDPNGLRRRVSVLNAK 480
           IDLR P   +  +   N++
Sbjct: 597 IDLRQPQSQKSLLQHFNSE 615


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 624  GCESYPSAGLCXNAL*GPKPA*PNPARICSTVEPRESGGLNNVTLLVAFRI---QNRDAT 454
            G   Y SAGL  + L GP P  P P  + S   P+++G  N + + +A+ I   QN+ + 
Sbjct: 1867 GYSGYTSAGLLHSGLGGPTPFMP-PNHLTS-FAPKKTGRWNAMHVRIAWEIYYHQNKQSP 1924

Query: 453  SK 448
             K
Sbjct: 1925 EK 1926


>AE013599-91|AAF57324.2|  844|Drosophila melanogaster CG8426-PA
           protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/79 (24%), Positives = 38/79 (48%)
 Frame = +1

Query: 244 QTNRPPTKNGHAXPPTESRKSC*SVNPSGVRACYSEPRHRTELYPDLRSRDARVKKKTDS 423
           QTN P  +NG     + +  SC  V+   ++    +  +R+ + P+  +     +++T S
Sbjct: 542 QTNSPHIQNGLPVSDSTNDNSCNVVDTISLKTMAQDAINRSAIDPNSLN-----QQQTSS 596

Query: 424 IDLRDPNGLRRRVSVLNAK 480
           IDLR P   +  +   N++
Sbjct: 597 IDLRQPQSQKSLLQHFNSE 615


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,107,017
Number of Sequences: 53049
Number of extensions: 821464
Number of successful extensions: 1745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)