Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0628.Seq
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 64 2e-10
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 60 1e-09
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 60 1e-09
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 37 0.015
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 29 5.3
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 435
KDLI ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I
Sbjct: 197 KDLIKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQI 256
Query: 436 RTISAFYEQLYGQE 477
+ + Y+ L+ ++
Sbjct: 257 QQVRDAYKMLFKKD 270
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 274 LKSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 444
++ E +G++ + ++A++ P ++AK LHD++ G+GT + +I + T + Y + I
Sbjct: 359 IEFEFSGDIRDGLLAVIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDI 418
Query: 445 SAFYEQLY 468
++ LY
Sbjct: 419 RNMFQSLY 426
Score = 34.7 bits (76), Expect = 0.081
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 87 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRR 206
TP+V+ LRKAMKG G + +I +LC+R
Sbjct: 140 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQR 179
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 346 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGQE 477
A+ L A+ G+G + +I ILC +N+ + IS ++ +YG++
Sbjct: 155 AEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKD 198
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 473 KSLESDLKGDTSGHFQEIVRVVCA 544
K LE DL G+TSGHF+ ++ +CA
Sbjct: 269 KDLERDLIGETSGHFKRLLVSLCA 292
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 435
KDLI ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I
Sbjct: 239 KDLIKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQI 298
Query: 436 RTISAFYEQLYGQE 477
+ + Y+ L+ ++
Sbjct: 299 QQVRDAYKMLFKKD 312
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 274 LKSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 444
++ E +G++ + ++A++ P ++AK LHD++ G+GT + +I + T + Y + I
Sbjct: 401 IEFEFSGDIRDGLLAVIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDI 460
Query: 445 SAFYEQLY 468
++ LY
Sbjct: 461 RNMFQSLY 468
Score = 34.7 bits (76), Expect = 0.081
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 87 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRR 206
TP+V+ LRKAMKG G + +I +LC+R
Sbjct: 182 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQR 221
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 346 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGQE 477
A+ L A+ G+G + +I ILC +N+ + IS ++ +YG++
Sbjct: 197 AEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKD 240
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 473 KSLESDLKGDTSGHFQEIVRVVCA 544
K LE DL G+TSGHF+ ++ +CA
Sbjct: 311 KDLERDLIGETSGHFKRLLVSLCA 334
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALM-TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 432
KD+I L + +G+LE I ALM TPL + K+L A+ G+GTDE +IEILC+ +
Sbjct: 60 KDIIQALDKKFSGDLEKAIFALMETPLD-YDVKQLKAAMKGLGTDEAVLIEILCSRTVDQ 118
Query: 433 IRTISAFYEQLYGQ 474
+R I YE+ YG+
Sbjct: 119 LRAIRVTYEKEYGK 132
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 274 LKSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 444
++ E +G+L+ IV + F+A++LH ++ G+GT + +I ++ T S + I
Sbjct: 223 IEKEFSGDLQKSYLTIVRAASDKQKFFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELI 282
Query: 445 SAFYEQLYGQ 474
A +++LY +
Sbjct: 283 KAEFQELYSK 292
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQ 218
L+ AMKG GTDE +I++LC R + Q
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQ 118
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 470 GKSLESDLKGDTSGHFQEIV 529
GK+LE+D+ GDTSG F++++
Sbjct: 131 GKALEADIAGDTSGEFRDLL 150
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALM-TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 432
KD+I L + +G+LE I ALM TPL + K+L A+ G+GTDE +IEILC+ +
Sbjct: 60 KDIIQALDKKFSGDLEKAIFALMETPLD-YDVKQLKAAMKGLGTDEAVLIEILCSRTVDQ 118
Query: 433 IRTISAFYEQLYGQ 474
+R I YE+ YG+
Sbjct: 119 LRAIRVTYEKEYGK 132
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 274 LKSELTGNLEN---VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 444
++ E +G+L+ IV + F+A++LH ++ G+GT + +I ++ T S + I
Sbjct: 223 IEKEFSGDLQKSYLTIVRAASDKQKFFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELI 282
Query: 445 SAFYEQLYGQ 474
A +++LY +
Sbjct: 283 KAEFQELYSK 292
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQ 218
L+ AMKG GTDE +I++LC R + Q
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQ 118
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 470 GKSLESDLKGDTSGHFQEIV 529
GK+LE+D+ GDTSG F++++
Sbjct: 131 GKALEADIAGDTSGEFRDLL 150
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 435
KDL E+K +G+ E+ +VAL+ EL+ +V G+GT+E+ +IEIL T +N I
Sbjct: 58 KDLEDEIKKAFSGDFEDFLVALLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEI 117
Query: 436 RTISAFYEQLYGQ 474
Y Y +
Sbjct: 118 EAAKNTYFMTYSK 130
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 KDLISELKSELTGNLENVIVALMTPL---PHFYAKELHDAVSGIGTDEEAIIEILCTLSN 426
K+ + EL+G+ +N++++L+ P ++A +H A G+GT ++ +I IL + S
Sbjct: 214 KEFQKLIDKELSGDFKNLVLSLIETSRNKPRYFANSIHLATKGMGTRDKDLIRILVSRSE 273
Query: 427 YGIRTISAFYEQLYGQ 474
+ I ++ L+G+
Sbjct: 274 NDLVIIEHEFQTLFGK 289
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/104 (25%), Positives = 46/104 (44%)
Frame = +1
Query: 232 GDLQD*LCKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEIL 411
G +D + L+ +L+ E G + AL P P++ A+ ++ ++S D IEI
Sbjct: 65 GAYEDMYSRKLLEDLEEECGGFFFEMCQALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIA 124
Query: 412 CTLSNYGIRTISAFYEQLYGQEPGIGLKRRHVGTLSRDCACRLC 543
CT S +R + Y+ Y + L + G + + LC
Sbjct: 125 CTRSPRQMRALRDTYQIDYRKSLDKDLTVKVEGVVGKMMHLLLC 168
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/110 (22%), Positives = 40/110 (36%)
Frame = +1
Query: 259 DLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIR 438
D+ K E EN L H K + AV+G + ++C + G
Sbjct: 65 DIKEMAKLEFADVFENDYFTNWDTLSHI-TKPVIAAVNGFALGGGTELALMCDIVYAGEN 123
Query: 439 TISAFYEQLYGQEPGIGLKRRHVGTLSRDCACRLCMANSAMKKPGASMKG 588
I E G PG+G +R +S+ A +C++ + A G
Sbjct: 124 AIFGQPEITIGTIPGLGGTQRWPRYVSKSVAMEICLSGDRLGAQEAKEDG 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,832,720
Number of Sequences: 27780
Number of extensions: 334675
Number of successful extensions: 697
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -