Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0624.Seq
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   5.9  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    29   5.9  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   5.9  
AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p pro...    29   7.8  
AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-P...    29   7.8  
AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-P...    29   7.8  
AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-P...    29   7.8  
AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye p...    29   7.8  

>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 361 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 474
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 361 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 474
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 361 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 474
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p
           protein.
          Length = 1322

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 346 FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAX*MANGKL*ALNFVKI 522
           F ++ TG+T  +P+L++L      P G+  + P P+ALP       A  K  ALN +++
Sbjct: 83  FLSLATGQT-GIPSLLSLP----PPTGLKEEYPMPLALPPLVPLEAARDKEQALNLMRL 136


>AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-PB,
           isoform B protein.
          Length = 1322

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 346 FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAX*MANGKL*ALNFVKI 522
           F ++ TG+T  +P+L++L      P G+  + P P+ALP       A  K  ALN +++
Sbjct: 83  FLSLATGQT-GIPSLLSLP----PPTGLKEEYPMPLALPPLVPLEAARDKEQALNLMRL 136


>AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-PA,
           isoform A protein.
          Length = 1543

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 346 FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAX*MANGKL*ALNFVKI 522
           F ++ TG+T  +P+L++L      P G+  + P P+ALP       A  K  ALN +++
Sbjct: 304 FLSLATGQT-GIPSLLSLP----PPTGLKEEYPMPLALPPLVPLEAARDKEQALNLMRL 357


>AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-PC,
           isoform C protein.
          Length = 1658

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 346 FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAX*MANGKL*ALNFVKI 522
           F ++ TG+T  +P+L++L      P G+  + P P+ALP       A  K  ALN +++
Sbjct: 419 FLSLATGQT-GIPSLLSLP----PPTGLKEEYPMPLALPPLVPLEAARDKEQALNLMRL 472


>AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye
           protein.
          Length = 1658

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +1

Query: 346 FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAX*MANGKL*ALNFVKI 522
           F ++ TG+T  +P+L++L      P G+  + P P+ALP       A  K  ALN +++
Sbjct: 419 FLSLATGQT-GIPSLLSLP----PPTGLKEEYPMPLALPPLVPLEAARDKEQALNLMRL 472


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,815,533
Number of Sequences: 53049
Number of extensions: 640454
Number of successful extensions: 1084
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)