Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0621.Seq
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 102 3e-22
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 102 3e-22
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 102 3e-22
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 36 0.037
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 33 0.20
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 32 0.35
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.61
11_01_0355 + 2679561-2680985,2681183-2682295 31 0.80
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975... 31 0.80
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 30 1.4
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 30 1.4
06_01_0080 + 644021-645463 30 1.9
10_08_0406 - 17688069-17690643,17691065-17691132 29 3.2
03_04_0243 + 19298293-19299117 28 5.6
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 7.5
12_01_1073 + 11135853-11137388,11137627-11137846,11137990-111381... 27 9.9
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 27 9.9
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 27 9.9
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 9.9
04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571 27 9.9
03_05_0907 + 28678909-28679253 27 9.9
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 102 bits (244), Expect = 3e-22
Identities = 50/92 (54%), Positives = 65/92 (70%)
Frame = +1
Query: 244 HQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 423
H N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 424 AHNTGLGPEKTSFFQALSIPXKISKGTIESST 519
NTGL P +TSFFQ L+IP KI+KGT+E T
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 59 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 238
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 239 KAIK 250
+ IK
Sbjct: 64 RCIK 67
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 102 bits (244), Expect = 3e-22
Identities = 50/92 (54%), Positives = 65/92 (70%)
Frame = +1
Query: 244 HQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 423
H N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 424 AHNTGLGPEKTSFFQALSIPXKISKGTIESST 519
NTGL P +TSFFQ L+IP KI+KGT+E T
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 59 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 238
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 239 KAIK 250
+ IK
Sbjct: 64 RCIK 67
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 102 bits (244), Expect = 3e-22
Identities = 47/85 (55%), Positives = 63/85 (74%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P NTGL
Sbjct: 75 NKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLD 134
Query: 445 PEKTSFFQALSIPXKISKGTIESST 519
P +TSFFQ L+IP KI+KGT+E T
Sbjct: 135 PSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 59 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 238
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 239 KAIK 250
+ IK
Sbjct: 64 RCIK 67
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +1
Query: 250 RPLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 414
R L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 415 --VIPAHN--TGLGPEKTSFFQALSI 480
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 17 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 196
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 197 GSS-IVLMGKNTM 232
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 29 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 205
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 206 IVLMGKNTM 232
I L GK M
Sbjct: 203 IFLAGKKVM 211
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.61
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +1
Query: 268 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 426
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 245 IKDPWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 379
I+D W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 476 IQDLWNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>03_02_0600 -
9748382-9748933,9749805-9749840,9751164-9751218,
9751588-9751697,9751955-9752602
Length = 466
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 164 QQMQQIRISLRGSSIVLMGKNTMMRKAIK-DPWTTIQP 274
+Q+Q IR +L + +L+ KNT++ KAI+ PW ++P
Sbjct: 74 KQLQGIRDTLPETCRLLVAKNTLVGKAIEGTPWEALKP 111
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 160 LATDAADPYLATWLQYRAHGKKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLV 339
+++D Y + ++ HGK D + + L NP L + P + N +FTRGD +
Sbjct: 1254 VSSDGRKEYYSKLVKADVHGK---DQEIYSIKLPGNPKLGEGKPENQ-NHAIIFTRGDAI 1309
Query: 340 EVRDKLLENKVQ 375
+ D +N ++
Sbjct: 1310 QTIDMNQDNYLE 1321
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +1
Query: 226 HNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAP 405
H++ + Q P N +K L I VGF+F LVE + L E ++Q P G I
Sbjct: 737 HSNESTSQSPAYNAKLHQKSLEVIP--VGFIFEDDTLVEPANSLAEPQLQQPLDNGLIDV 794
Query: 406 LSVVIPAHNTGLGPEKTSFFQALSIPXK 489
++ T + S L +P K
Sbjct: 795 NQLLESVVETSRHVGRLSVSTNLDLPFK 822
>06_01_0080 + 644021-645463
Length = 480
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 492 NLXRDRKSLEERGLLWTEAGVVGGND 415
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 100 DHPTLGRVPKMFHRGCR*RGLATDAADPYLAT-WLQYRAHGKKHNDAQSHQRPL 258
D P R ++FHR R RG A D A LA W+ + ND Q H + L
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAKAL 841
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 419 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 276
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 396 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 268
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>12_01_1073 +
11135853-11137388,11137627-11137846,11137990-11138178,
11138257-11138457,11138547-11139246,11163479-11164106
Length = 1157
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 251 DPWTT-IQPSRNCCHTSRATLASCSPAETSLRSVTNCWR 364
D W + + S N CH + ++CS + N WR
Sbjct: 649 DDWVSKVNSSSNFCHACNSNKSNCSERHCRRLKLENIWR 687
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 280 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 381
KLLP VGFV RG V+ +K+++ P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497
>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 122 YPKCFI--VGADNVGSQQMQQIRISLRGSSIV 211
Y KC I VG DN+ Q MQQ R SL I+
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEIL 1323
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCF 136
+++Y VKII+LL EY CF
Sbjct: 68 RADYKVKIIELLKEYVDCF 86
>04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571
Length = 740
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 548 PCHRLQXVYIVDDSIVPFEILXGIERAWKKEVFSGPRPVLWAGMTTDNG 402
P HR ++ + I + G+ R W K++ S P+ V+W NG
Sbjct: 345 PVHR--DALVLGEPIAYDAVHEGLARVWYKDLDSVPQYVVWEQPNAPNG 391
>03_05_0907 + 28678909-28679253
Length = 114
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 440 RPVLWAGMTTDNGAMAPGRAGA 375
RP+L NGA APG AGA
Sbjct: 53 RPLLHGSAAAANGASAPGNAGA 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,601,684
Number of Sequences: 37544
Number of extensions: 425990
Number of successful extensions: 1170
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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