Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0621.Seq
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 159 2e-39
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 159 2e-39
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 159 2e-39
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 159 2e-39
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 33 0.34
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 33 0.34
AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p pro... 30 3.2
AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA ... 30 3.2
BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p pro... 28 9.6
BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p pro... 28 9.6
BT003263-1|AAO25020.1| 450|Drosophila melanogaster LD22594p pro... 28 9.6
BT001556-1|AAN71311.1| 504|Drosophila melanogaster RE12395p pro... 28 9.6
BT001503-1|AAN71258.1| 504|Drosophila melanogaster LD35207p pro... 28 9.6
AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA... 28 9.6
AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-P... 28 9.6
AE013599-398|AAF59266.2| 450|Drosophila melanogaster CG11166-PB... 28 9.6
AE013599-397|AAS64903.1| 504|Drosophila melanogaster CG11166-PG... 28 9.6
AE013599-396|AAS64902.1| 504|Drosophila melanogaster CG11166-PF... 28 9.6
AE013599-395|AAM68890.1| 504|Drosophila melanogaster CG11166-PE... 28 9.6
AE013599-394|AAM68889.1| 504|Drosophila melanogaster CG11166-PD... 28 9.6
AE013599-393|AAM68888.1| 504|Drosophila melanogaster CG11166-PC... 28 9.6
AE013599-392|AAF59263.2| 504|Drosophila melanogaster CG11166-PA... 28 9.6
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 159 bits (387), Expect = 2e-39
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NT
Sbjct: 69 LENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNT 128
Query: 436 GLGPEKTSFFQALSIPXKISKGTIE 510
GLGPEKTSFFQALSIP KISKGTIE
Sbjct: 129 GLGPEKTSFFQALSIPTKISKGTIE 153
Score = 111 bits (267), Expect = 8e-25
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 530 LEAGDKVGASEATLLNMXIISPF 598
L+ GDKVGASEATLLNM ISPF
Sbjct: 161 LKPGDKVGASEATLLNMLNISPF 183
Score = 35.5 bits (78), Expect = 0.064
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 480 PXQDFKGYY*IINDVHXLKPVTRLELLKPPFSTCXSSLHFSYGLVVKQVYGFWNYF 647
P + KG IINDV LKP ++ + + FSYGL+V QVY + F
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIF 199
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 159 bits (387), Expect = 2e-39
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NT
Sbjct: 69 LENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNT 128
Query: 436 GLGPEKTSFFQALSIPXKISKGTIE 510
GLGPEKTSFFQALSIP KISKGTIE
Sbjct: 129 GLGPEKTSFFQALSIPTKISKGTIE 153
Score = 111 bits (267), Expect = 8e-25
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 530 LEAGDKVGASEATLLNMXIISPF 598
L+ GDKVGASEATLLNM ISPF
Sbjct: 161 LKPGDKVGASEATLLNMLNISPF 183
Score = 35.5 bits (78), Expect = 0.064
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 480 PXQDFKGYY*IINDVHXLKPVTRLELLKPPFSTCXSSLHFSYGLVVKQVYGFWNYF 647
P + KG IINDV LKP ++ + + FSYGL+V QVY + F
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIF 199
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 159 bits (387), Expect = 2e-39
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NT
Sbjct: 69 LENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNT 128
Query: 436 GLGPEKTSFFQALSIPXKISKGTIE 510
GLGPEKTSFFQALSIP KISKGTIE
Sbjct: 129 GLGPEKTSFFQALSIPTKISKGTIE 153
Score = 111 bits (267), Expect = 8e-25
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 530 LEAGDKVGASEATLLNMXIISPF 598
L+ GDKVGASEATLLNM ISPF
Sbjct: 161 LKPGDKVGASEATLLNMLNISPF 183
Score = 35.5 bits (78), Expect = 0.064
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 480 PXQDFKGYY*IINDVHXLKPVTRLELLKPPFSTCXSSLHFSYGLVVKQVYGFWNYF 647
P + KG IINDV LKP ++ + + FSYGL+V QVY + F
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIF 199
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 159 bits (387), Expect = 2e-39
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNP LEKLLPHIKGNVGFVFT+GDL EVRDKLLE+KV+APARPGAIAPL V+IPA NT
Sbjct: 69 LENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNT 128
Query: 436 GLGPEKTSFFQALSIPXKISKGTIE 510
GLGPEKTSFFQALSIP KISKGTIE
Sbjct: 129 GLGPEKTSFFQALSIPTKISKGTIE 153
Score = 111 bits (267), Expect = 8e-25
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 530 LEAGDKVGASEATLLNMXIISPF 598
L+ GDKVGASEATLLNM ISPF
Sbjct: 161 LKPGDKVGASEATLLNMLNISPF 183
Score = 35.5 bits (78), Expect = 0.064
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 480 PXQDFKGYY*IINDVHXLKPVTRLELLKPPFSTCXSSLHFSYGLVVKQVYGFWNYF 647
P + KG IINDV LKP ++ + + FSYGL+V QVY + F
Sbjct: 144 PTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIF 199
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 26 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 205
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 206 IVLMGKNTMMR 238
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 26 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 205
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 206 IVLMGKNTMMR 238
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p
protein.
Length = 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 269 QPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 379
+P+R CC + +A L CSP +T S C++T S+L
Sbjct: 114 KPTR-CCASPKAPLVPCSPMDTPKSS---CFKTASRL 146
>AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA
protein.
Length = 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 269 QPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 379
+P+R CC + +A L CSP +T S C++T S+L
Sbjct: 114 KPTR-CCASPKAPLVPCSPMDTPKSS---CFKTASRL 146
>BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p
protein.
Length = 613
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 242 AIKDP--WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT-KSKLQLVLVPL 400
A +DP WTT QP++N T+ T S SL++ N + ++KL+L+ + L
Sbjct: 336 ASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHL 391
>BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p
protein.
Length = 613
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 242 AIKDP--WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT-KSKLQLVLVPL 400
A +DP WTT QP++N T+ T S SL++ N + ++KL+L+ + L
Sbjct: 336 ASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHL 391
>BT003263-1|AAO25020.1| 450|Drosophila melanogaster LD22594p
protein.
Length = 450
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 59 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 118
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 119 TKTKVSTGS 127
>BT001556-1|AAN71311.1| 504|Drosophila melanogaster RE12395p
protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>BT001503-1|AAN71258.1| 504|Drosophila melanogaster LD35207p
protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA
protein.
Length = 841
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 186 SRYVAP--VSCSWEKTQ*C--AKPSKTPGQQSSPRETVATHQGQ 305
SRY V CS+EK C A PS+ P QQ +P V HQ Q
Sbjct: 106 SRYATHEYVHCSYEKEVVCDQANPSQAPPQQPAP--PVQQHQQQ 147
>AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-PA
protein.
Length = 584
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 242 AIKDP--WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT-KSKLQLVLVPL 400
A +DP WTT QP++N T+ T S SL++ N + ++KL+L+ + L
Sbjct: 307 ASEDPPKWTTPQPAQNVYSTANVTTGSYKHRLKSLKATKNFSSSIETKLKLLKLHL 362
>AE013599-398|AAF59266.2| 450|Drosophila melanogaster CG11166-PB,
isoform B protein.
Length = 450
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 59 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 118
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 119 TKTKVSTGS 127
>AE013599-397|AAS64903.1| 504|Drosophila melanogaster CG11166-PG,
isoform G protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE013599-396|AAS64902.1| 504|Drosophila melanogaster CG11166-PF,
isoform F protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE013599-395|AAM68890.1| 504|Drosophila melanogaster CG11166-PE,
isoform E protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE013599-394|AAM68889.1| 504|Drosophila melanogaster CG11166-PD,
isoform D protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE013599-393|AAM68888.1| 504|Drosophila melanogaster CG11166-PC,
isoform C protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
>AE013599-392|AAF59263.2| 504|Drosophila melanogaster CG11166-PA,
isoform A protein.
Length = 504
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 NVGFVFTRGDLVEVRDKLLENKVQAPARPGA--IAPLSVVIPAHNTGLGPEKTSFFQALS 477
N+ TR ++ +L + P GA AP++V +P +G P+ + +S
Sbjct: 113 NIQVKKTRNEVTNKSVQLPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRIS 172
Query: 478 IPXKISKGT 504
K+S G+
Sbjct: 173 TKTKVSTGS 181
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,515,402
Number of Sequences: 53049
Number of extensions: 674728
Number of successful extensions: 2308
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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