Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0617.Seq
(907 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 38 0.015
SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7) 37 0.019
SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 34 0.18
SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 32 0.55
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 32 0.73
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 32 0.73
SB_45983| Best HMM Match : HLH (HMM E-Value=1.3) 31 0.97
SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87) 31 0.97
SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087) 31 1.3
SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_3953| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073) 31 1.7
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 31 1.7
SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 30 2.2
SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 30 3.0
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 30 3.0
SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6) 30 3.0
SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8) 30 3.0
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 30 3.0
SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043) 29 3.9
SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05) 29 3.9
SB_58651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8) 29 6.8
SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4) 29 6.8
SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_39283| Best HMM Match : ADK (HMM E-Value=3.7) 29 6.8
SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_14675| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_9104| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 28 9.0
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_36405| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 28 9.0
SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 28 9.0
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5) 28 9.0
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 28 9.0
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_23268| Best HMM Match : HEAT (HMM E-Value=0.31) 28 9.0
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 IFXLRWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWPLYGKTAPFKTNLDRSR-RDEKA 190
IF RWSLPP GC KQPDS + + R+ P L T L R R R E A
Sbjct: 75 IFSFRWSLPPILGCIPKQPDSSK--AHRERPRSPQTGLSPSTTCCSKQLGRPRIRRESA 131
>SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7)
Length = 187
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = -2
Query: 363 IFXLRWSLPPA*GCTLKQPDS----KERP 289
IF RWSLPP GC KQPDS +ERP
Sbjct: 106 IFSFRWSLPPILGCIPKQPDSSKAHRERP 134
>SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 351 RWSLPPA*GCTLKQPDSKERPSRR 280
RWSLPP GC KQPDS + +R
Sbjct: 35 RWSLPPILGCIPKQPDSSKAHRKR 58
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 351 RWSLPPA*GCTLKQPDSKERPSRRDPPSLRAWPLYGKTAPFKTNLDRSR-RDEKA 190
RWSLPP GC KQPDS + + R+ P L T L R R R E A
Sbjct: 62 RWSLPPILGCIPKQPDSSK--AHRERPRSPQTGLSPSTTCCSKQLGRPRIRRESA 114
>SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 3 ALELVDPPGCRGRITR 50
ALELVDPPGCR IT+
Sbjct: 12 ALELVDPPGCRNSITK 27
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3
Query: 371 PRSYLXLDGVYHPLRAALSSNPTLR 297
PRS LDGVYHP AA +NPT R
Sbjct: 55 PRS--ALDGVYHPFWAAFPNNPTRR 77
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -3
Query: 371 PRSYLXLDGVYHPLRAALSSNPTLR 297
PRS LDGVYHP AA +NPT R
Sbjct: 341 PRS--ALDGVYHPFWAAFPNNPTRR 363
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 ALELVDPPGCRGRIT 47
ALELVDPPGCR IT
Sbjct: 69 ALELVDPPGCRNSIT 83
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 ALELVDPPGCRGRIT 47
ALELVDPPGCR IT
Sbjct: 99 ALELVDPPGCRNSIT 113
>SB_45983| Best HMM Match : HLH (HMM E-Value=1.3)
Length = 68
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3
Query: 353 LDGVYHPLRAALSSNPTLR 297
LDGVYHP AA +NPT R
Sbjct: 2 LDGVYHPFWAAFPNNPTRR 20
>SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87)
Length = 209
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3
Query: 3 ALELVDPPGCRGRITR 50
ALELVDPPGCR I R
Sbjct: 12 ALELVDPPGCRNSIKR 27
>SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRR 53
ALELVDPPGCR I R
Sbjct: 12 ALELVDPPGCRNSIDNR 28
>SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 31.5 bits (68), Expect = 0.97
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI 56
ALELVDPPGCR I ++
Sbjct: 12 ALELVDPPGCRNSIVTKV 29
>SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRR 53
ALELVDPPGCR I R
Sbjct: 12 ALELVDPPGCRNSIINR 28
>SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087)
Length = 171
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 3 ALELVDPPGCRGRITR 50
ALELVDPPGCR I++
Sbjct: 12 ALELVDPPGCRNSISK 27
>SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRR 53
ALELVDPPGCR I R
Sbjct: 12 ALELVDPPGCRNSIQAR 28
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI 56
ALELVDPPGCR + R+
Sbjct: 75 ALELVDPPGCRNSMDSRV 92
>SB_3953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 5 SRTSGSPGLQGEDHPPNL-SILVSGGK-ETNQD 97
SRTSGSPGLQ D PN S VSG + T+QD
Sbjct: 12 SRTSGSPGLQEFDSNPNRPSNAVSGDQATTSQD 44
>SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073)
Length = 106
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRR 53
ALELVDPPGCR + +R
Sbjct: 12 ALELVDPPGCRNSMKQR 28
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI 56
ALELVDPPGCR I + +
Sbjct: 99 ALELVDPPGCRNSIQQMV 116
>SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 3 ALELVDPPGCRGRIT 47
ALELVDPPGCR I+
Sbjct: 12 ALELVDPPGCRNSIS 26
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3
Query: 371 PRSYLXLDGVYHPLRAALSSNPTLR 297
PRS LDG YHP AA +NPT R
Sbjct: 55 PRS--ALDGFYHPFWAAFPNNPTRR 77
>SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 3 ALELVDPPGCRGRITR 50
ALELVDPPGCR I +
Sbjct: 12 ALELVDPPGCRNSIAQ 27
>SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI 56
ALELVDPPGCR I + +
Sbjct: 12 ALELVDPPGCRNSIHKAL 29
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 3 ALELVDPPGCRGRIT 47
ALELVDPPGCR I+
Sbjct: 656 ALELVDPPGCRNSIS 670
>SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI*AY**AEEKKLTRI 98
ALELVDPPGCR + ++ + AE+ + ++
Sbjct: 12 ALELVDPPGCRNSMKMKVESIDGAEKLDIPKV 43
>SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 29 ALELVDPPGCRNSI 42
>SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6)
Length = 205
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8)
Length = 123
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 29 ALELVDPPGCRNSI 42
>SB_46352| Best HMM Match : L71 (HMM E-Value=0.19)
Length = 179
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 12 ALELVDPPGCRNSI 25
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 49 ALELVDPPGCRNSI 62
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 3 ALELVDPPGCRGRI 44
ALELVDPPGCR I
Sbjct: 88 ALELVDPPGCRNSI 101
>SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 3 ALELVDPPGCRGRITR 50
ALELVDPPGCR +++
Sbjct: 12 ALELVDPPGCRNSMSQ 27
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRR 53
ALELVDPPGCR + R
Sbjct: 32 ALELVDPPGCRNSMPDR 48
>SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI*AY 65
ALELVDPPGCR ++ A+
Sbjct: 12 ALELVDPPGCRNSMSNPFAAF 32
>SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043)
Length = 205
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 3 ALELVDPPGCRGRITRRI 56
ALELVDPPGCR + +
Sbjct: 12 ALELVDPPGCRNSMNANV 29
>SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05)
Length = 415
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 9 ELVDPPGCRGRITR 50
ELVDPPGCR IT+
Sbjct: 319 ELVDPPGCRNSITK 332
>SB_58651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 52 RRVILPLQPGGSTSSRA 2
RR+I LQPGGSTSSRA
Sbjct: 18 RRLIEFLQPGGSTSSRA 34
>SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 88 ALELVDPPGCR 98
>SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8)
Length = 182
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4)
Length = 205
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 67 ALELVDPPGCR 77
>SB_39283| Best HMM Match : ADK (HMM E-Value=3.7)
Length = 171
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 ALELVDPPGCR 35
ALELVDPPGCR
Sbjct: 12 ALELVDPPGCR 22
>SB_14675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 52 RRVILPLQPGGSTSSRA 2
R++I LQPGGSTSSRA
Sbjct: 12 RKIIEFLQPGGSTSSRA 28
>SB_9104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1
Query: 55 IRRVILPLQPGGSTSSRA 2
+ RVI LQPGGSTSSRA
Sbjct: 22 VLRVIEFLQPGGSTSSRA 39
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 62 CLGMQPKMGGKLHLKLNI 79
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 8 CLGMQPKMGGKLHLKLNI 25
>SB_36405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1
Query: 55 IRRVILPLQPGGSTSSRA 2
I R+I LQPGGSTSSRA
Sbjct: 20 ISRLIEFLQPGGSTSSRA 37
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 62 CLGMQPKMGGKLHLKLNI 79
>SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 36 CLGMQPKMGGKLHLKLNI 53
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 61 CLGMQPKMGGKLHLKLNI 78
>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
Length = 207
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 49 RVILPLQPGGSTSSRA 2
RVI LQPGGSTSSRA
Sbjct: 82 RVIEFLQPGGSTSSRA 97
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 120 CLGMQPKMGGKLHLKLNI 137
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 19 CLGMQPKMGGKLHLKLNI 36
>SB_23268| Best HMM Match : HEAT (HMM E-Value=0.31)
Length = 154
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 5 SRTSGSPGLQGEDHPPNL 58
SRTSGSPGLQ D P L
Sbjct: 12 SRTSGSPGLQEFDRMPTL 29
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 311 CLRVQP*AGGKLHLRXNM 364
CL +QP GGKLHL+ N+
Sbjct: 725 CLGMQPKMGGKLHLKLNI 742
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,337,925
Number of Sequences: 59808
Number of extensions: 470442
Number of successful extensions: 1718
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -