Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0617.Seq
         (907 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    27   0.59 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   2.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   2.4  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   2.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.5  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = -3

Query: 263 GPGPSTGKRP------RSRRTWTGVVATRKRNLPNTTSPVID 156
           G G S GK+P      ++ R W GV+   KR  P   S ++D
Sbjct: 400 GDGGSDGKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 257 GPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 156
           GP   + PR    WTGV+ T     PN+   ++D
Sbjct: 202 GPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 257 GPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 156
           GP   + PR    WTGV+ T     PN+   ++D
Sbjct: 202 GPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 257 GPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 156
           GP   + PR    WTGV+ T     PN+   ++D
Sbjct: 88  GPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 315 KQPDSKERPSRRDPPSLRAWP 253
           K P S+  P RR P S   WP
Sbjct: 249 KIPPSRRNPRRRSPRSGGRWP 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,444
Number of Sequences: 2352
Number of extensions: 14398
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)