Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0617.Seq
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p pro...    44   4e-04
AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-P...    44   4e-04
BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p pro...    32   1.2  
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA...    32   1.2  
AY060635-1|AAL28183.1|  255|Drosophila melanogaster GH05059p pro...    30   5.0  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    29   6.6  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    29   6.6  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    29   6.6  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    29   6.6  

>AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p
           protein.
          Length = 321

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +1

Query: 364 DRGSKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQI 489
           D  +++ +A K++ +  W+N  HFV+WCRYG   Q+ R RQ+
Sbjct: 268 DIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV 308


>AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-PA
           protein.
          Length = 321

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +1

Query: 364 DRGSKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQI 489
           D  +++ +A K++ +  W+N  HFV+WCRYG   Q+ R RQ+
Sbjct: 268 DIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV 308


>BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p
           protein.
          Length = 623

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 315 KQPDSKERPSRRDPPSLRAWPLYGKTAPFKTNLDRSRRD-EKAEPPEHHISR 163
           ++P  +  P R DP  L+   +  K+A  K +L R +RD E+A  P   I+R
Sbjct: 203 EEPQEQNVPQREDPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINR 254


>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
           protein.
          Length = 1301

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 315 KQPDSKERPSRRDPPSLRAWPLYGKTAPFKTNLDRSRRD-EKAEPPEHHISR 163
           ++P  +  P R DP  L+   +  K+A  K +L R +RD E+A  P   I+R
Sbjct: 302 EEPQEQNVPQREDPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINR 353


>AY060635-1|AAL28183.1|  255|Drosophila melanogaster GH05059p
           protein.
          Length = 255

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = -3

Query: 323 ALSSNPTLRSVPLAATLRRYGPGPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID*NNG 144
           A+ S  + RS  +      + PGPS   R  S R        R+ N   +  PV    + 
Sbjct: 105 AIPSMRSARSSAVHTAFAVWPPGPSQSARSASARIRARATVARRANSAPSMWPVPTIASL 164

Query: 143 IQCWAIFL 120
           +QC AIF+
Sbjct: 165 LQCVAIFI 172


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
           protein.
          Length = 2176

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 317 SSNPTLRSVPLAATLRRYGPGPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 159
           S +PT+   P  A      PG   G+ RP++R + +    TR   L    SPVI
Sbjct: 309 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 362


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
           protein.
          Length = 2342

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 317 SSNPTLRSVPLAATLRRYGPGPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 159
           S +PT+   P  A      PG   G+ RP++R + +    TR   L    SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
           EAST protein.
          Length = 2362

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 317 SSNPTLRSVPLAATLRRYGPGPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 159
           S +PT+   P  A      PG   G+ RP++R + +    TR   L    SPVI
Sbjct: 486 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 539


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
           protein.
          Length = 2301

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 317 SSNPTLRSVPLAATLRRYGPGPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 159
           S +PT+   P  A      PG   G+ RP++R + +    TR   L    SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,966,915
Number of Sequences: 53049
Number of extensions: 697816
Number of successful extensions: 1757
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)