Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0615.Seq
         (513 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PD50 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q5GH36 Cluster: XK-related protein 9; n=4; Danio rerio|...    32   8.8  
UniRef50_Q7QVD8 Cluster: GLP_542_13370_15142; n=1; Giardia lambl...    32   8.8  
UniRef50_A7TQI8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  

>UniRef50_Q4PD50 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1025

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +2

Query: 113 TWA*CSSANTTKGTRQSQFEKSIPAATPLGKYSCYACFR 229
           TWA  SS+ T     QS+ E+   A  P  +YSC  CFR
Sbjct: 59  TWA-ASSSRTNTAKEQSKNERRATAKRPREQYSCVECFR 96


>UniRef50_Q5GH36 Cluster: XK-related protein 9; n=4; Danio
           rerio|Rep: XK-related protein 9 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 378

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 180 MLFSN*LCLVPFVVLADEHHAHVHPNVAPFKRLAN 76
           +LFSN + L+   V     H HVHP V P +R+A+
Sbjct: 321 ILFSNSIGLIFLAVYYSRLHHHVHPPVPPSERIAD 355


>UniRef50_Q7QVD8 Cluster: GLP_542_13370_15142; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_542_13370_15142 - Giardia lamblia
           ATCC 50803
          Length = 590

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 120 AHVHPNVAPFKRLANL*QRNLSLVLKKCLIN 28
           A  HPNV+P+ RL  L +RN  ++L K + N
Sbjct: 228 AFYHPNVSPYARLVYLEERNRVILLPKAMPN 258


>UniRef50_A7TQI8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 981

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 414 KTVLEYRLGNFGKKKTNTGRTEKYSKENSINQVEIQKTR 298
           +T++  +  +  ++K    +TEKYSK NS+N +   K R
Sbjct: 708 RTLMAGKFNHKSQEKLEVMKTEKYSKHNSLNSLSYSKKR 746


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,526,174
Number of Sequences: 1657284
Number of extensions: 7388111
Number of successful extensions: 20237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20236
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)