Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0615.Seq
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14569-1|CAA32707.1|  490|Drosophila melanogaster protein ( Dros...    28   8.5  
X12506-1|CAA31024.1|  490|Drosophila melanogaster twist protein ...    28   8.5  
BT025192-1|ABF17883.1|  490|Drosophila melanogaster FI01303p pro...    28   8.5  
AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p pro...    28   8.5  
AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p pro...    28   8.5  
AE013599-3525|ABC66041.1|  490|Drosophila melanogaster CG2956-PB...    28   8.5  
AE013599-3524|AAF46941.1|  490|Drosophila melanogaster CG2956-PA...    28   8.5  

>X14569-1|CAA32707.1|  490|Drosophila melanogaster protein (
           Drosophila melanogastertwist mRNA. ).
          Length = 490

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>X12506-1|CAA31024.1|  490|Drosophila melanogaster twist protein
           protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>BT025192-1|ABF17883.1|  490|Drosophila melanogaster FI01303p
           protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p
           protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p
           protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>AE013599-3525|ABC66041.1|  490|Drosophila melanogaster CG2956-PB,
           isoform B protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


>AE013599-3524|AAF46941.1|  490|Drosophila melanogaster CG2956-PA,
           isoform A protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +3

Query: 96  GQRWDEHGRDARQPTQQKGQGKVSLRKAFQRQHRWANIHATLASDGQHQKSITMTDY 266
           G  W+EHG+ AR       Q   SL    Q +H+   IH       QHQ+ I   DY
Sbjct: 142 GSSWNEHGKRARSSGDYDCQTGGSL--VMQPEHK-KLIHQQQQQQQQHQQQI-YVDY 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,605,678
Number of Sequences: 53049
Number of extensions: 343148
Number of successful extensions: 765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)