Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0599.Seq
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016675-4|AAB66137.1|  356|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>AF016675-4|AAB66137.1|  356|Caenorhabditis elegans Hypothetical
           protein T27B7.5 protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 313 NTTHYRANWVPGPPVEVGRHFTLNKLECS 227
           N    R+ W   PP E+GR F ++K+E S
Sbjct: 317 NNLMQRSIWEARPPREIGRVFNISKIEFS 345


>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 480 LPFAIQXAQLLGRAIGAGLFAITPAGE--RGMCCKAIKLGNARV 355
           L F+     L G++IGA L   T AGE   G   K +K G++RV
Sbjct: 761 LDFSSDSQYLRGQSIGAHLLFWTKAGEICDGTSVKDVKWGSSRV 804


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,709,962
Number of Sequences: 27780
Number of extensions: 352937
Number of successful extensions: 651
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)