Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0597.Seq
(884 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 32 0.71
SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9) 31 1.6
SB_42621| Best HMM Match : L_lactis_RepB_C (HMM E-Value=1.8) 30 2.9
SB_37320| Best HMM Match : GP46 (HMM E-Value=5) 30 2.9
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_41792| Best HMM Match : DUF495 (HMM E-Value=1.5) 29 3.8
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_17618| Best HMM Match : Bombolitin (HMM E-Value=2.1e-07) 29 5.0
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_46041| Best HMM Match : LIM (HMM E-Value=1.5) 29 6.6
SB_5577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_5569| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 8.7
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 8.7
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 34 CPSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARPHEHLPLGPVS 213
CP+ TAT +T + ATT + T P T+P + + +P P+ P
Sbjct: 119 CPTATATTSTTATTPAKTTSATTKPVMTPTTPAPMTLPPISPIDPPRTQPPPIFPIDPPR 178
Query: 214 ERAYPMRPV 240
+ P+ P+
Sbjct: 179 TQPPPIPPI 187
>SB_20432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 304 SPGGWRSGTCSRWHLCKEALQKLGAWDTLSPKLAPAEDV 188
S G WR+G + +CK ++KL ++ L P L P+E +
Sbjct: 7 SRGFWRNGR-EKTVICKLVVRKLASFSVLKPTLVPSEAI 44
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARP 183
P TTA +T E++ ++ TT TP A E + P + T+A P
Sbjct: 637 PETTAAPETTMAPETTAEIETTMTPETNAAPETTSAPETTAAPETTAAP 685
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 31 LCPSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSA 177
+ P TTAT +T E++ TT TP A E T P + T+A
Sbjct: 521 IAPETTATPETTAAPETTVAPETTMTPETTAAPETTTAPETTAASETTA 569
>SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9)
Length = 312
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -3
Query: 345 IDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKKHCKNWAHGIRSLRNWPQRKMFVGPGAGR 166
+ ++ W GG++AVG E + AGI+ K +N + LR P++ GP R
Sbjct: 16 LGAQDRWVVSQKGGQIAVGALEGIDAGIWEKGR-ENLVYVRYELRPLPEQNGEPGPMFVR 74
Query: 165 T*RSASGHCL 136
A +C+
Sbjct: 75 EGSDAFANCV 84
>SB_42621| Best HMM Match : L_lactis_RepB_C (HMM E-Value=1.8)
Length = 339
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 342 DSKTNWTSLLNGGRLAVGDPEHVPAGIYAKKHCKNWAHGIR-SLRNWPQRKMFVGPGAGR 166
+ K + + G ++AVG E + AGI+ K + + +R LR P++ GP GR
Sbjct: 135 EHKIGGSLVKRGYQIAVGALEGIDAGIWEKG--REYLVYVRFELRPLPEQNGEPGPMFGR 192
Query: 165 T*RSASGHCLRF 130
A +C+RF
Sbjct: 193 EGSDAFANCVRF 204
>SB_37320| Best HMM Match : GP46 (HMM E-Value=5)
Length = 555
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 342 DSKTNWTSLLNGGRLAVGDPEHVPAGIYAKKHCKNWAHGIR-SLRNWPQRKMFVGPGAGR 166
+ K + + G ++AVG E + AGI+ K + + +R LR P++ GP GR
Sbjct: 135 EHKIGGSLVKRGYQIAVGALEGIDAGIWEKG--REYLVYVRFELRPLPEQNGEPGPMFGR 192
Query: 165 T*RSASGHCLRF 130
A +C+RF
Sbjct: 193 EGSDAFANCVRF 204
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARP 183
P TT +TF+ E+ TT P A E +P S+ T+A P
Sbjct: 2973 PDTTGAAETTFVPETIATPETTTVPGTTAAPETTAVPESTSVPETTALP 3021
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARP 183
P TTA+ +T +++G TTF P E T+P + T+A P
Sbjct: 2961 PKTTASPETTAKPDTTGAAETTFVPETIATPETTTVPGTTAAPETTAVP 3009
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSA 177
P TTA+ +T +++G TTF P A E T+P ++ T+A
Sbjct: 3099 PETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVPGTTA 3145
>SB_41792| Best HMM Match : DUF495 (HMM E-Value=1.5)
Length = 835
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -3
Query: 393 SLVVVAPKASV-QKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKKHCKNWAHGIR- 220
SL P A + +++ + K + + GG++AVG E + AGI+ K + + +R
Sbjct: 158 SLAPAEPLAPITEEEGRSEHKIGGSLVKRGGQIAVGALEGIDAGIWEKG--REYLVYVRY 215
Query: 219 SLRNWPQRKMFVGPGAGRT*RSASGHCL 136
LR P++K GP R A +C+
Sbjct: 216 ELRPLPEQKGEPGPMFKREWSDAFANCV 243
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 189 TSSAGASFGES-VSHAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSWFC 338
TSS+ S ES ++H PS + LH+ Q H RH A S C
Sbjct: 841 TSSSNKSRNESRITHLPSRLNIELHRAQTSHEMSHALHTYRHRAQTSHEMC 891
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSA 177
P TTA+ +T +++G TTF P A E T+P ++ T+A
Sbjct: 1944 PETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVPGTTA 1990
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 37 PSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARPHEHLPLGPVSE 216
P TTA +T L +++ TT P A E T+P+ + T+A HE +S
Sbjct: 2995 PKTTAAPETTTLPKTTAAPETTTLPKTTAAPETTTLPKTTAAPETTA-VHESTSAPEMSS 3053
Query: 217 RAYPMRPVFAVLL 255
R R V L
Sbjct: 3054 RTEAFRSTSPVPL 3066
>SB_17618| Best HMM Match : Bombolitin (HMM E-Value=2.1e-07)
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 9 KCFHCRIVMP--FHNSNRIFHFFM*IFREGGNHFYPFAGNCVRTVDNAQR 152
+CF CR P F+N+ F F +GG++F+ A N T NAQ+
Sbjct: 341 RCF-CRYAPPQSFYNNRMSVKLFYVDFEDGGDNFFKEAQNFTMT-SNAQK 388
>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1652
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 61 STFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARPHEHLPLGPVSERAYPMRP 237
+T L S+ K+A TF+ L P SL+S++ +P L S ++ ++P
Sbjct: 963 ATSLKSSAPKIAATFSRLSTVKPSPKPNIAATSLKSSAVKPPSRLNNAATSSKSNTVKP 1021
>SB_46041| Best HMM Match : LIM (HMM E-Value=1.5)
Length = 1236
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 342 DSKTNWTSLLNGGRLAVGDPEHVPAGIYAK 253
+ K W + GG++AVG E + AGI+ K
Sbjct: 173 EHKIGWLLVKRGGQIAVGALEGIDAGIWEK 202
>SB_5577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -3
Query: 429 DRYXTRQTLLGNSLVVVAPKASV-QKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAK 253
DR T++GN+ P A + +++ + K + ++ GG++AVG E + AGI+ K
Sbjct: 161 DRRYRLFTVVGNA--PAEPLAPITEEEGRSEHKIGGSLVIRGGKMAVGALEGIDAGIWEK 218
Query: 252 KHCKNWAHGIR-SLRNWPQRKMFVGPGAGRT*RSASGHCL 136
+ + +R LR P++ +GP + A +C+
Sbjct: 219 G--REYLVYVRYVLRPLPEQNGELGPMFEQEGSDAFANCV 256
>SB_5569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -3
Query: 429 DRYXTRQTLLGNSLVVVAPKASV-QKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAK 253
DR T++GN+ P A + +++ + K + ++ GG++AVG E + AGI+ K
Sbjct: 30 DRRYRLFTVVGNA--PAEPLAPITEEEGRSEHKIGGSLVIRGGKMAVGALEGIDAGIWEK 87
Query: 252 KHCKNWAHGIR-SLRNWPQRKMFVGPGAGRT*RSASGHCL 136
+ + +R LR P++ +GP + A +C+
Sbjct: 88 G--REYLVYVRYVLRPLPEQNGELGPMFEQEGSDAFANCV 125
>SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 160 LRSTSARPHEHLPLGPVSERAYPMRPVFAVLLCINASGNMF 282
+R RPHE V + P+R A LLC+ +S ++F
Sbjct: 1 MREAHVRPHERQTRTDVGDGFDPVRISDAFLLCLLSSASLF 41
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 31 LCPSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSA 177
L P TT ST ES+ TT P ASE P + +T+A
Sbjct: 2726 LAPETTLAPESTVALESTVASETTVAPKTTAASEATLAPESVAPETTAA 2774
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 31 LCPSTTATGYSTFLCESSGKVATTFTPLLATASEP*TMPRGASLRSTSARP 183
+ P TTA+ +T E++ ATT P A E P S T+ P
Sbjct: 1380 MVPETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVAP 1430
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,260,881
Number of Sequences: 59808
Number of extensions: 768045
Number of successful extensions: 2539
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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