Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0597.Seq
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 33 1.4
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 33 1.4
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 33 1.4
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 31 7.3
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 31 7.3
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 31 7.3
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 31 7.3
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 31 7.3
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +1
Query: 37 PSTTATGY---STFLCESSGKVATTFTPLLAT----ASEP*TMPRGASLRSTSARPHEHL 195
PSTTATG+ ST L + A T LAT A T +S ST P +H+
Sbjct: 178 PSTTATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHM 237
Query: 196 PLGPVSERAYPMRP 237
P + PMRP
Sbjct: 238 PSDTAASPVPPMRP 251
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +1
Query: 37 PSTTATGY---STFLCESSGKVATTFTPLLAT----ASEP*TMPRGASLRSTSARPHEHL 195
PSTTATG+ ST L + A T LAT A T +S ST P +H+
Sbjct: 178 PSTTATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHM 237
Query: 196 PLGPVSERAYPMRP 237
P + PMRP
Sbjct: 238 PSDTAASPVPPMRP 251
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 33.1 bits (72), Expect = 1.4
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +1
Query: 37 PSTTATGY---STFLCESSGKVATTFTPLLAT----ASEP*TMPRGASLRSTSARPHEHL 195
PSTTATG+ ST L + A T LAT A T +S ST P +H+
Sbjct: 178 PSTTATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHM 237
Query: 196 PLGPVSERAYPMRP 237
P + PMRP
Sbjct: 238 PSDTAASPVPPMRP 251
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 GASFGESVSHAPSF-CSASLHKCQREHVPDRQPPGDRHSAVKSSWFCCRW*NLSARWLSV 377
G S E+ ++ SF C+A +H C H PDR D C+ +LSA WL V
Sbjct: 987 GKSLSENPANRYSFVCNALMHVCVGHHDPDR--VNDIAILCAELTGYCK--SLSAEWLGV 1042
Query: 378 LQRPGYCRAVSDAXC 422
L+ C + ++ C
Sbjct: 1043 LK--ALCCSSNNGTC 1055
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 GASFGESVSHAPSF-CSASLHKCQREHVPDRQPPGDRHSAVKSSWFCCRW*NLSARWLSV 377
G S E+ ++ SF C+A +H C H PDR D C+ +LSA WL V
Sbjct: 887 GKSLSENPANRYSFVCNALMHVCVGHHDPDR--VNDIAILCAELTGYCK--SLSAEWLGV 942
Query: 378 LQRPGYCRAVSDAXC 422
L+ C + ++ C
Sbjct: 943 LK--ALCCSSNNGTC 955
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 GASFGESVSHAPSF-CSASLHKCQREHVPDRQPPGDRHSAVKSSWFCCRW*NLSARWLSV 377
G S E+ ++ SF C+A +H C H PDR D C+ +LSA WL V
Sbjct: 1075 GKSLSENPANRYSFVCNALMHVCVGHHDPDR--VNDIAILCAELTGYCK--SLSAEWLGV 1130
Query: 378 LQRPGYCRAVSDAXC 422
L+ C + ++ C
Sbjct: 1131 LK--ALCCSSNNGTC 1143
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 GASFGESVSHAPSF-CSASLHKCQREHVPDRQPPGDRHSAVKSSWFCCRW*NLSARWLSV 377
G S E+ ++ SF C+A +H C H PDR D C+ +LSA WL V
Sbjct: 887 GKSLSENPANRYSFVCNALMHVCVGHHDPDR--VNDIAILCAELTGYCK--SLSAEWLGV 942
Query: 378 LQRPGYCRAVSDAXC 422
L+ C + ++ C
Sbjct: 943 LK--ALCCSSNNGTC 955
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 GASFGESVSHAPSF-CSASLHKCQREHVPDRQPPGDRHSAVKSSWFCCRW*NLSARWLSV 377
G S E+ ++ SF C+A +H C H PDR D C+ +LSA WL V
Sbjct: 887 GKSLSENPANRYSFVCNALMHVCVGHHDPDR--VNDIAILCAELTGYCK--SLSAEWLGV 942
Query: 378 LQRPGYCRAVSDAXC 422
L+ C + ++ C
Sbjct: 943 LK--ALCCSSNNGTC 955
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,265,443
Number of Sequences: 237096
Number of extensions: 3852648
Number of successful extensions: 12435
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12431
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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