Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0595.Seq
(873 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R... 202 7e-51
UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep: F... 99 1e-19
UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2; Obtectom... 99 2e-19
UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;... 85 3e-15
UniRef50_Q05FR9 Cluster: Glutaminyl-tRNA synthetase; n=1; Candid... 34 5.4
UniRef50_UPI0000F1E005 Cluster: PREDICTED: hypothetical protein,... 33 7.2
UniRef50_Q1ATV3 Cluster: Fumarylacetoacetate (FAA) hydrolase; n=... 33 9.5
>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
Fibrohexamerin precursor - Bombyx mori (Silk moth)
Length = 220
Score = 202 bits (494), Expect = 7e-51
Identities = 104/138 (75%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Frame = +3
Query: 255 HDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 434
HD+CRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL
Sbjct: 82 HDQCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 141
Query: 435 TTVFDKGNNFDLCSAFTFADLAGGLPSSTLTLMTNAQRSG---CLKI*PCCTFTRESTSS 605
TTVFDKGNNFDLCSAFTFADLAGGLP + N QR+ + + RE
Sbjct: 142 TTVFDKGNNFDLCSAFTFADLAGGLP--IFHINPNDQRTAQWLSKDLTLLHIYEREHIFG 199
Query: 606 ERGTGLARSFISRTLCDF 659
+R LARSFISRTLCDF
Sbjct: 200 KR-NWLARSFISRTLCDF 216
Score = 145 bits (352), Expect = 1e-33
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +1
Query: 64 GPPSPIYRPCYLDDYKCISDHLAAISKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNL 243
GPPSPIYRPCYLDDYKCISDHLAA SKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNL
Sbjct: 18 GPPSPIYRPCYLDDYKCISDHLAANSKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNL 77
Query: 244 ITRN 255
ITRN
Sbjct: 78 ITRN 81
>UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep:
Fibroin P25 - Papilio xuthus
Length = 215
Score = 99.1 bits (236), Expect = 1e-19
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 HDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 434
H++CRVSEF+ N+ + VL++DCP L+FESNR QH S +ED S+ I G+YPLIRL
Sbjct: 78 HNRCRVSEFFINLSSKTAVLSLDCPNLDFESNRLTIQHASLQEDRQFSYTIQGTYPLIRL 137
Query: 435 TTVFDKGNNFDLCSAFTFADLAGGLPSSTLTLMTNAQRSGCLK--I*PCCTFTRESTSSE 608
TT N +LCS+ TFAD+ LP L N Q + L + F RE
Sbjct: 138 TTNLHASNGLNLCSSLTFADVV-ALPKFRLN-PNNKQTANYLSRDLTLLNIFERE-CFFW 194
Query: 609 RGTGLARSFISRTLCDF 659
R + LAR FI+ +C++
Sbjct: 195 RASLLARYFINSLICNY 211
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 IYRPCYLDDYKCISDHLAAISKCIPG-RGQIPSQYEIPVFQFEIPYFNATYVDHNLITRN 255
+ RPC L D CI +LAA S+C P G+IP++Y + F PYFNATY+D+NL+ N
Sbjct: 18 VVRPCALSDLACIGRNLAANSRCNPNVPGRIPARYTVQSLPFHAPYFNATYIDYNLVVSN 77
>UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2;
Obtectomera|Rep: Fibrohexamerin precursor - Galleria
mellonella (Wax moth)
Length = 218
Score = 98.7 bits (235), Expect = 2e-19
Identities = 52/135 (38%), Positives = 75/135 (55%)
Frame = +3
Query: 255 HDKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRL 434
+D CRVSEF+ NV+ +VL VDCP L+ ES+RTL QH S +E+ +++I G YPLIRL
Sbjct: 82 NDACRVSEFFFNVKADTSVLAVDCPNLDLESDRTLIQHASLQEETTYNYHIRGIYPLIRL 141
Query: 435 TTVFDKGNNFDLCSAFTFADLAGGLPSSTLTLMTNAQRSGCLKI*PCCTFTRESTSSERG 614
TT + +LC+AFT+AD+ LP + + + T + R
Sbjct: 142 TTNLLNADRLNLCNAFTYADVT-ALPIFKIDPKDRPTANFLSRDLSLLNIYERETFAYRP 200
Query: 615 TGLARSFISRTLCDF 659
L R F++ +CDF
Sbjct: 201 PQLIRQFVNSLICDF 215
Score = 83.8 bits (198), Expect = 5e-15
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 GPPSPIYRPCYLDDYKCISDHLAAISKCIPG-RGQIPSQYEIPVFQFEIPYFNATYVDHN 240
GP + + RPC LDD KCI D+++A S C RG IPS+Y IP F FE P+FNA+Y+D+N
Sbjct: 17 GPANNVVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNN 76
Query: 241 LITRN 255
LI RN
Sbjct: 77 LIIRN 81
>UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;
Yponomeuta evonymellus|Rep: Low molecular weight silk
protein - Yponomeuta evonymella (Bird-cherry ermine
moth)
Length = 217
Score = 84.6 bits (200), Expect = 3e-15
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +3
Query: 258 DKCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKEDVVLSFYINGSYPLIRLT 437
D C VSEF+ N+ T K +L++DC E++RT+ QH S ED V ++IN +YP++RLT
Sbjct: 80 DSCVVSEFFFNMDTDKALLSIDCLDFGLEADRTVLQHRSLHEDSVYQYHINSTYPILRLT 139
Query: 438 TVFDKGNNFDLCSAFTFADLAGGLPSSTLTLMTNAQRSGCLK-I*PCCTFTRESTSSERG 614
T + + + CS +TF ++ LP + + + F RE T + RG
Sbjct: 140 TNMNNADRINFCSEYTFVEIP-VLPIFHIDPKDKLTSKFLTRDMSELFAFERE-TFNYRG 197
Query: 615 TGLARSFISRTLCDF 659
+G+ F+ +CDF
Sbjct: 198 SGIMNWFLQHKICDF 212
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 79 IYRPCYLDDYKCISDHLAAISKCIPGRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNT 258
I RPC+L D +CI D+LAA S C + F+FE P+F+++Y+++NLI RN
Sbjct: 20 IVRPCHLQDLECIQDNLAANSHCKTNIAGTAPTATVSNFRFECPFFHSSYIENNLIMRNV 79
Query: 259 TNAVSANF 282
+ V + F
Sbjct: 80 DSCVVSEF 87
Score = 37.5 bits (83), Expect = 0.44
Identities = 14/29 (48%), Positives = 24/29 (82%)
Frame = +2
Query: 509 PIFHINPNDQRTAQWLSKDLTLLHIYERE 595
PIFHI+P D+ T+++L++D++ L +ERE
Sbjct: 163 PIFHIDPKDKLTSKFLTRDMSELFAFERE 191
>UniRef50_Q05FR9 Cluster: Glutaminyl-tRNA synthetase; n=1;
Candidatus Carsonella ruddii PV|Rep: Glutaminyl-tRNA
synthetase - Carsonella ruddii (strain PV)
Length = 391
Score = 33.9 bits (74), Expect = 5.4
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +2
Query: 479 FHVRRPGRGSPIFHINPN----DQRTAQWLSKDLTLLHIYEREHIFGKRNWAGEVLHQQN 646
F +R+ G I I N + + KDL +E ++F + + +N
Sbjct: 235 FFLRKIGITPKILKIYTNIIGISNKNIYFKKKDLKNSIFFELNYLFKNCCYFNNFIKVKN 294
Query: 647 TLRLSVVTTERHFSNIIFYFANTFRHXGFFALKSVQFFKIYKLY 778
+ V+++ +F NI FYF N R FF +K + K+ K++
Sbjct: 295 IKKNIVISSLFNFKNINFYFFN-IRFNFFFFIKKTYYKKLKKIF 337
>UniRef50_UPI0000F1E005 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 1013
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 524 NPNDQRTAQWLSKDLTLLHIYEREHIFGKRNWAGEVLHQQNTLRLSVVTTERHFSNII 697
+PN +S L L + + G+ +AG+ LH +++ + +V TE+ FS ++
Sbjct: 821 SPNSNPVVVMVSSPLRLKSTDVHDRLTGQTGYAGQALHMESSAQEAVEATEKIFSELV 878
>UniRef50_Q1ATV3 Cluster: Fumarylacetoacetate (FAA) hydrolase; n=3;
Actinobacteria (class)|Rep: Fumarylacetoacetate (FAA)
hydrolase - Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129)
Length = 320
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 85 RPCYLDDYKCISDHLAAISKCIPGRGQIPSQ-YEIPVFQFEIPY 213
+P L D+ +H+ I++ + G +P YEIP F F PY
Sbjct: 65 QPPTLRDFVVFEEHVEGITRSVSEEGGVPEAWYEIPTFYFGNPY 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,563,583
Number of Sequences: 1657284
Number of extensions: 18307227
Number of successful extensions: 47429
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47396
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -