Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0595.Seq
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    30   0.080
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    28   0.43 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.56 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   2.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   4.0  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    24   5.3  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    24   7.0  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   9.2  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.2  

>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 30.3 bits (65), Expect = 0.080
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = +1

Query: 91  CYLDDYKCISDHLAAISKCIP--GRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNTTN 264
           CY+ D+    + +  +  CI   GR  +P+  E         Y N TYVD NL      N
Sbjct: 24  CYMRDF-AHKNEINEMRVCIGTNGRMSVPANREYHYKNLRDRYTNCTYVDGNLEITWIQN 82

Query: 265 AVSANFM 285
               NF+
Sbjct: 83  ITDLNFL 89


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 89  PATWTITNASPTTWPRSRNVSRAEGRSPRSTR 184
           PA     +  PT+WPRSR  S+ + R PR  R
Sbjct: 275 PARRRSRSTRPTSWPRSRPTSKPK-RLPRRRR 305


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 154 GRGQIPSQYEIPVFQFEIPYFNATYVDHNLITRNTTNAVSANFM 285
           GR  +P+  E         Y N TYVD NL      N    NF+
Sbjct: 6   GRMSVPANREYHYKNLRDRYTNCTYVDGNLEITWIQNITDLNFL 49


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 756 NCTLFNAKKPICR-KVFAK*NIMLEKCRSVVTTESRRV 646
           NC++F+ KK  CR K  AK N + ++   V   E  +V
Sbjct: 646 NCSIFSRKKKQCRDKYLAKHNAVFDQLDLVTYEEVVKV 683


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 512 WETPGQVCERESRTQVEIVALIKHCR 435
           W    Q C   S T+ E VAL + CR
Sbjct: 815 WSARKQQCVTLSSTEAEYVALAEACR 840


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -3

Query: 544 CALVIRVNVEDGRPPARSANVKAEHKS 464
           CAL  R N    RPP RS   K   K+
Sbjct: 22  CALYTRQNPGTNRPPNRSQKAKQTVKT 48


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 521 INPNDQRTAQW 553
           +NPN QRTA W
Sbjct: 535 VNPNGQRTAVW 545


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 75  SDLQALLLGRLQMHLRPPGRDLEMY 149
           +D    LL  L   L PPG DL  +
Sbjct: 179 TDKDGALLANLHRQLDPPGEDLASF 203


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 486 FADLAGGLPSSTLTLMTNAQRSGCLKI 566
           FA+L   +PS+ +T +TN  R    K+
Sbjct: 121 FANLRQHIPSTVVTALTNGARGANKKL 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,834
Number of Sequences: 2352
Number of extensions: 19303
Number of successful extensions: 89
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)