Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0591.Seq
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 377 NPGVTQLNRLAAHPPFASWRNS 442
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 640 TGTTLNPISVYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLQFAI 494
           T + LN +++ S D   I  I    L+N    Q+ + N NK+L +  A+
Sbjct: 400 TFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNKLLQVPDAL 448


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 785 RNPKREPPI*KLXRGKPAKXWREKE 859
           R+P+R+PPI +       + W+ K+
Sbjct: 227 RSPRRDPPINRQHTPCAGRRWKTKQ 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,118
Number of Sequences: 2352
Number of extensions: 19461
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)