Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0590.Seq
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   4.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 516  MTKTEMKFDVCQK 554
            +TKT++ FD+C K
Sbjct: 1314 ITKTQLDFDLCSK 1326


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 516  MTKTEMKFDVCQK 554
            +TKT++ FD+C K
Sbjct: 1314 ITKTQLDFDLCSK 1326


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 181 SLELDGYYISLSLVFSSLVQ 122
           +LE+D  Y+   L  SSLVQ
Sbjct: 261 TLEIDNLYLKHKLEISSLVQ 280


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 583 VVYSFKLLYFF*HTSNFISVFVIGHSLSPF 494
           VVYSFK   F+   S    +  IG  LS F
Sbjct: 33  VVYSFKRRIFYQDESPISRLVYIGTDLSYF 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,924
Number of Sequences: 336
Number of extensions: 2993
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)