Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0583.Seq
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   7.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   7.0  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   7.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 300 FQRVRD*FNDTVRMRDRNDTRSERVLNE*NSYGLPRDRLKSTTNGSR 160
           F RV+D F + V +R  +  +   V  + + YGL  +  +   +GSR
Sbjct: 579 FDRVKDLFLEAVLLRYPDLNKIFYVQTDSSGYGLGAELYQIQEDGSR 625


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 451 AMIQFRALGGGPVPNSPYSGRITIHWPSFYNVV 549
           A I F    G P+P   Y+   T  W S +N V
Sbjct: 237 AEIAFAYKYGDPIPYIQYTETETKTWGSVFNTV 269


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 65  DGTFVSCVRSPSARYV 112
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 65  DGTFVSCVRSPSARYV 112
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 324 YEKIFFRNFQRVRD*FNDTVRMRDRNDTRSERVL 223
           Y +I  + +Q +RD F D+ R    NDT   + L
Sbjct: 15  YPEIQEKVYQELRDIFQDSDRPITFNDTLQMKYL 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,382
Number of Sequences: 336
Number of extensions: 3467
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)