Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0583.Seq
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.54 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   8.9  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   8.9  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -3

Query: 508 HYRANWVPGPPRVPETVSSQTFKQTRTSPRLHGCDNRRVALASALRQETRKY 353
           HY  +WVP    V +  +      T+  P   G    R  L +A+   T +Y
Sbjct: 753 HYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGPKTSRCRLLAAVADSTMRY 804


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 357 FLVSCLSADASATRLLSQPCSLGLVRVCLNVCDDTV 464
           FL   + ADAS   +L       LV+    VC DTV
Sbjct: 63  FLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -3

Query: 478 PRVPETVSSQTFKQTRTSPRLHGCDNRRVA 389
           PR+P    +Q        P  HG + R+ A
Sbjct: 357 PRIPRDFDTQNLTTETLGPLPHGWEQRKTA 386


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 357 FLVSCLSADASATRLLSQPCSLGLVRVCLNVCDDTV 464
           FL   + ADAS   +L       LV+    VC DTV
Sbjct: 63  FLAHPIDADASHCSILENEVVFELVKQDPTVCWDTV 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,880
Number of Sequences: 2352
Number of extensions: 16414
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)