Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0581.Seq
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.8  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 56  NKSFNFVNVLFVAFSYYYTYFLNSLFHI 139
           N SF   NVLF     YYT     L  +
Sbjct: 100 NSSFVVANVLFQLIHVYYTVVFTLLLGV 127


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 56  NKSFNFVNVLFVAFSYYYTYFLNSLFHI 139
           N SF   NVLF     YYT     L  +
Sbjct: 100 NSSFVVANVLFQLIHVYYTVVFTLLLGV 127


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 56  NKSFNFVNVLFVAFSYYYTYFLNSLFHI 139
           N SF   NVLF     YYT     L  +
Sbjct: 420 NSSFVVANVLFQLIHVYYTVVFTLLLGV 447


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 95  FSYYYTYFLNSLFHICNSFFTQKIRN 172
           F +YYTYFL  +  +C   F  K RN
Sbjct: 154 FQFYYTYFLCVI--VC--IFRGKYRN 175


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 483 VIQNK*FVIN*NTPSYFYPF*ETNIL 406
           +IQN   V    T ++F PF  TNI+
Sbjct: 95  LIQNLKVVATTKTKAWFLPFVVTNII 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,755
Number of Sequences: 336
Number of extensions: 2448
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)