Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0578.Seq
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6F15 Cluster: PREDICTED: similar to CG8243-PA;...    44   0.001
UniRef50_Q0IG44 Cluster: Smap1; n=1; Aedes aegypti|Rep: Smap1 - ...    43   0.003
UniRef50_Q8SWV3 Cluster: RE02759p; n=5; Diptera|Rep: RE02759p - ...    38   0.12 
UniRef50_Q4ZZK7 Cluster: Putative uncharacterized protein; n=1; ...    35   0.86 
UniRef50_Q31T48 Cluster: Putative uncharacterized protein; n=2; ...    34   1.5  
UniRef50_Q872V2 Cluster: Putative uncharacterized protein B23G1....    33   2.6  
UniRef50_Q8K2V1 Cluster: Serine/threonine-protein phosphatase 4 ...    33   2.6  
UniRef50_A7CVE7 Cluster: Putative uncharacterized protein; n=1; ...    33   3.5  
UniRef50_Q9LU30 Cluster: Genomic DNA, chromosome 3, P1 clone: MX...    32   4.6  
UniRef50_A4F3R7 Cluster: Secreted frizzled related protein; n=1;...    31   8.0  
UniRef50_Q9LSE2 Cluster: Transcription factor ICE1; n=5; core eu...    31   8.0  

>UniRef50_UPI0000DB6F15 Cluster: PREDICTED: similar to CG8243-PA;
           n=3; Endopterygota|Rep: PREDICTED: similar to CG8243-PA
           - Apis mellifera
          Length = 486

 Score = 44.4 bits (100), Expect = 0.001
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -1

Query: 385 SKYEQXXNTXXRXWVPPQLPKVNWDKEIDE 296
           +KYE       R WVPP LPKVNWDKE+DE
Sbjct: 121 AKYEHK-KYIAREWVPPPLPKVNWDKELDE 149


>UniRef50_Q0IG44 Cluster: Smap1; n=1; Aedes aegypti|Rep: Smap1 -
           Aedes aegypti (Yellowfever mosquito)
          Length = 469

 Score = 42.7 bits (96), Expect = 0.003
 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = -1

Query: 385 SKYEQXXNTXXRXWVPPQLPKVNWDKEID-EVDGSTEKXKEV---GDVSLG 245
           +KYE       R WVPP  PKV+WDKEID E++    K K     G +SLG
Sbjct: 121 AKYEHK-KYLAREWVPPPPPKVDWDKEIDEEIERQKRKKKAASSGGTISLG 170


>UniRef50_Q8SWV3 Cluster: RE02759p; n=5; Diptera|Rep: RE02759p -
           Drosophila melanogaster (Fruit fly)
          Length = 517

 Score = 37.5 bits (83), Expect = 0.12
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = -1

Query: 385 SKYEQXXNTXXRXWVPPQLPKVNWDKEIDE 296
           +KYE       R WVPP  PKV+W KEIDE
Sbjct: 121 AKYEHK-KYLAREWVPPSPPKVDWAKEIDE 149


>UniRef50_Q4ZZK7 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas syringae pv. syringae B728a|Rep: Putative
           uncharacterized protein - Pseudomonas syringae pv.
           syringae (strain B728a)
          Length = 371

 Score = 34.7 bits (76), Expect = 0.86
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -3

Query: 128 TP-GHQQNVQRSADLLGLDTAKPDPVPSNDLVPNSARA 18
           TP GH Q VQ SA+L G +  +PDP+  + L+ N  RA
Sbjct: 93  TPFGHHQAVQASAELPGFNGEQPDPLTGHYLLGNGYRA 130


>UniRef50_Q31T48 Cluster: Putative uncharacterized protein; n=2;
           Enterobacteriaceae|Rep: Putative uncharacterized protein
           - Shigella boydii serotype 4 (strain Sb227)
          Length = 204

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 182 YARYHVGLIIFLISNSGGRQGSERYVADFFXLFCRSIYFVYFFIPVDFG 328
           +A +  GL +F  +    R G+E++ A FF L  +  YF + F  + FG
Sbjct: 25  FALFQQGLSLFNFTTQFFRTGTEQHPAQFFYLSPQMFYFPFIFFDLFFG 73


>UniRef50_Q872V2 Cluster: Putative uncharacterized protein
           B23G1.020; n=2; Sordariomycetes|Rep: Putative
           uncharacterized protein B23G1.020 - Neurospora crassa
          Length = 434

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 136 PPAHPDTSKTSNXPQISSAWTPP-NRTPCPATTS 38
           P + P+TS T   P ISS   PP   TP P TT+
Sbjct: 80  PSSTPNTSTTQQPPPISSTTAPPTTSTPAPPTTT 113


>UniRef50_Q8K2V1 Cluster: Serine/threonine-protein phosphatase 4
           regulatory subunit 1; n=40; Euteleostomi|Rep:
           Serine/threonine-protein phosphatase 4 regulatory
           subunit 1 - Mus musculus (Mouse)
          Length = 951

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 388 ASKYEQXXNTXXRXWVPPQLPKVNWDKEIDEVDGSTEKXKEVGDVSLGPLPAP 230
           A+  +Q        W  P LPK++ DKE+ +        +  GDV   PLP P
Sbjct: 446 ATPLDQDMFNSFHFWRTP-LPKIDLDKELQQDPEERLSPERTGDVPAAPLPGP 497


>UniRef50_A7CVE7 Cluster: Putative uncharacterized protein; n=1;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 128

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 136 PPAHPDTSKTSNXPQISSAWTPPNRTPCPATTSCR 32
           P A+P TS + N P  +SA + P  TP PA++S R
Sbjct: 10  PNANPLTSASVNPPAFASARSTPRNTPEPASSSQR 44


>UniRef50_Q9LU30 Cluster: Genomic DNA, chromosome 3, P1 clone: MXL8;
            n=3; Arabidopsis thaliana|Rep: Genomic DNA, chromosome 3,
            P1 clone: MXL8 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1261

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 343  VPPQLPKVNWDKEIDEVDGSTEKXKEVGDVSLGPLP 236
            + P LP    D++ DE+DGS +  K V  +S+G  P
Sbjct: 924  IRPSLPTETSDRKPDELDGSDKDPKNVSGLSIGSSP 959


>UniRef50_A4F3R7 Cluster: Secreted frizzled related protein; n=1;
           Lubomirskia baicalensis|Rep: Secreted frizzled related
           protein - Lubomirskia baicalensis
          Length = 335

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 142 SXPPAHPDTSKTSNXPQISSAWTPPNRTPCPATTSCRIRHEL 17
           S PP+ P T+  S+ P    A TPP  +P PA  +C +++ +
Sbjct: 168 SPPPSTPATTAVSSSP----APTPPTTSPAPACGACSLQNRV 205


>UniRef50_Q9LSE2 Cluster: Transcription factor ICE1; n=5; core
           eudicotyledons|Rep: Transcription factor ICE1 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 494

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 121 DTSKTSNXPQISSAWTPPNRTPCPATTSCRIRHELVPEFL 2
           +++   + P  SS++ P   TP P T SCR++ EL P  L
Sbjct: 364 ESTPPGSLPPTSSSFHP--LTPTPQTLSCRVKEELCPSSL 401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,367,906
Number of Sequences: 1657284
Number of extensions: 7255336
Number of successful extensions: 24394
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24362
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)