Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0574.Seq
         (989 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK223143-1|BAD96863.1|  583|Homo sapiens trehalase (brush-border...    82   3e-15
AK223140-1|BAD96860.1|  583|Homo sapiens trehalase (brush-border...    82   3e-15
AB000824-1|BAA24381.1|  583|Homo sapiens trehalase protein.            82   3e-15
BC109206-1|AAI09207.1|  552|Homo sapiens TREH protein protein.         52   2e-06

>AK223143-1|BAD96863.1|  583|Homo sapiens trehalase (brush-border
           membrane glycoprotein) variant protein.
          Length = 583

 Score = 82.2 bits (194), Expect = 3e-15
 Identities = 37/75 (49%), Positives = 44/75 (58%)
 Frame = -2

Query: 253 EVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALM 74
           E YYWDSY+ M GL  S   + V  M+ NF   + TYGH+PNG R YYL RSQPP   LM
Sbjct: 171 EFYYWDSYWVMEGLLLSEMAETVKGMLQNFLDLVKTYGHVPNGGRVYYLQRSQPPLLTLM 230

Query: 73  VELLAQHEGDAALKQ 29
           ++    H  D A  Q
Sbjct: 231 MDCYLTHTNDTAFLQ 245


>AK223140-1|BAD96860.1|  583|Homo sapiens trehalase (brush-border
           membrane glycoprotein) variant protein.
          Length = 583

 Score = 82.2 bits (194), Expect = 3e-15
 Identities = 37/75 (49%), Positives = 44/75 (58%)
 Frame = -2

Query: 253 EVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALM 74
           E YYWDSY+ M GL  S   + V  M+ NF   + TYGH+PNG R YYL RSQPP   LM
Sbjct: 171 EFYYWDSYWVMEGLLLSEMAETVKGMLQNFLDLVKTYGHVPNGGRVYYLQRSQPPLLTLM 230

Query: 73  VELLAQHEGDAALKQ 29
           ++    H  D A  Q
Sbjct: 231 MDCYLTHTNDTAFLQ 245


>AB000824-1|BAA24381.1|  583|Homo sapiens trehalase protein.
          Length = 583

 Score = 82.2 bits (194), Expect = 3e-15
 Identities = 37/75 (49%), Positives = 44/75 (58%)
 Frame = -2

Query: 253 EVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALM 74
           E YYWDSY+ M GL  S   + V  M+ NF   + TYGH+PNG R YYL RSQPP   LM
Sbjct: 171 EFYYWDSYWVMEGLLLSEMAETVKGMLQNFLDLVKTYGHVPNGGRVYYLQRSQPPLLTLM 230

Query: 73  VELLAQHEGDAALKQ 29
           ++    H  D A  Q
Sbjct: 231 MDCYLTHTNDTAFLQ 245


>BC109206-1|AAI09207.1|  552|Homo sapiens TREH protein protein.
          Length = 552

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 21/39 (53%), Positives = 24/39 (61%)
 Frame = -2

Query: 145 YGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQ 29
           YGH+PNG R YYL RSQPP   LM++    H  D A  Q
Sbjct: 176 YGHVPNGGRVYYLQRSQPPLLTLMMDCYLTHTNDTAFLQ 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,024,010
Number of Sequences: 237096
Number of extensions: 3226362
Number of successful extensions: 8035
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8033
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13269380858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)