Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0566.Seq
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein.                   35   0.34 
BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein ...    35   0.34 
AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein ...    35   0.34 
AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein ...    35   0.34 
AL358113-1|CAH70867.1|  993|Homo sapiens tight junction protein ...    35   0.34 
AF489824-1|AAM28524.1|  993|Homo sapiens tight junction protein ...    35   0.34 
AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein ...    35   0.34 
AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ...    35   0.34 
AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein ...    35   0.34 
AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ...    35   0.34 
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr...    31   7.4  

>L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein.
          Length = 1116

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein 2
           (zona occludens 2) protein.
          Length = 1190

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein 2
           (zona occludens 2) protein.
          Length = 1043

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein 2
           (zona occludens 2) protein.
          Length = 1190

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AL358113-1|CAH70867.1|  993|Homo sapiens tight junction protein 2
           (zona occludens 2) protein.
          Length = 993

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AF489824-1|AAM28524.1|  993|Homo sapiens tight junction protein 2
           protein.
          Length = 993

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein
           ZO-2 isoform C protein.
          Length = 1020

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 176 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 222


>AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein
           ZO-2 isoform C protein.
          Length = 1167

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 176 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 222


>AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein
           ZO-2 isoform A protein.
          Length = 1043

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein
           ZO-2 isoform A protein.
          Length = 1190

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 314 RILRSGIKRQHSRQGQRDRGRSYQRGRWSDIGS*SDRRCDISGRGSNV 171
           R L  G+ + H+R   R RGRS +RG   D G   DR  D S RG ++
Sbjct: 199 RSLERGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRS-RGRSI 245


>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
            protein.
          Length = 1640

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 164  SCIRCCPCRLCRTGGRFSCLCRSICPFGSFAPYLAAPAGYVAV*YQTAKSCL 319
            SC++ CP  L     R SCLC++       + + A P G+  +     K CL
Sbjct: 1103 SCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHCACPEGWAGL--ACEKECL 1152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,114,324
Number of Sequences: 237096
Number of extensions: 2177079
Number of successful extensions: 4840
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4836
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)