Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0566.Seq
         (891 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g14450.1 68418.m01691 GDSL-motif lipase/hydrolase family prot...    30   1.8  
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do...    29   5.5  
At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transfera...    28   7.2  

>At5g14450.1 68418.m01691 GDSL-motif lipase/hydrolase family protein
           similar to early nodulin ENOD8 [Medicago sativa]
           GI:304037, elicitor-induced glycoprotein iEP4 [Daucus
           carota] GI:1911765, pollen-expressed coil protein
           [Medicago sativa] GI:1110502; contains InterPro Entry
           IPR001087 Lipolytic enzyme, G-D-S-L family
          Length = 389

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 137 LRACCGYHCRCRHQWCA*K 81
           L+ CCGYH +  H WC  K
Sbjct: 313 LKVCCGYHEKYDHIWCGNK 331


>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
           domain-containing protein contains Pfam profiles
           PF02170: PAZ domain, PF02171: Piwi domain
          Length = 1194

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 302 SGIKRQHSRQGQRDRGRSYQ-RGRWSDIGS*SDRRCDISGRG 180
           SG    H R G  DRGR Y  RG     G   DR    SGRG
Sbjct: 44  SGRGDGHGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRG 85


>At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 449

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 561 PFPTVAHLKWRMANCKR*YFVKIRVKFLLNQLIFLTIRPXI 683
           P+PT  H+      CKR +F  ++    L   +F +I P +
Sbjct: 12  PYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDL 52


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,579,688
Number of Sequences: 28952
Number of extensions: 297734
Number of successful extensions: 677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)