Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0563.Seq
(939 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 156 7e-37
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 128 3e-28
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 103 5e-21
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 102 2e-20
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 102 2e-20
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 102 2e-20
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 102 2e-20
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 102 2e-20
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 80 9e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 77 5e-13
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 77 5e-13
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 76 2e-12
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 74 5e-12
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 67 7e-10
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 65 2e-09
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 62 1e-08
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 62 2e-08
UniRef50_Q8ILN8 Cluster: Ribosomal protein S25, putative; n=3; P... 60 8e-08
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 57 7e-07
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 54 5e-06
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 44 0.004
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.052
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 39 0.16
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 39 0.21
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.64
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.5
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 2.0
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 36 2.0
UniRef50_Q6E6G6 Cluster: Small subunit ribosomal protein S25e; n... 36 2.0
UniRef50_UPI00006CAF51 Cluster: hypothetical protein TTHERM_0068... 35 2.6
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 35 2.6
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 35 3.4
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 34 4.5
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 34 6.0
UniRef50_Q5GSK6 Cluster: Uncharacterized homolog of invasion-ass... 33 7.9
UniRef50_O52852 Cluster: Bpu10I restriction endonuclease beta su... 33 7.9
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 33 7.9
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 156 bits (379), Expect = 7e-37
Identities = 74/82 (90%), Positives = 79/82 (96%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGKVRDKLNNQVLFDK TYEKLYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKG
Sbjct: 35 SKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKG 94
Query: 189 LIKQVVQHHGQVIYTRATKGDD 254
LIKQVVQHH QVIYTRATKGD+
Sbjct: 95 LIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 128 bits (308), Expect = 3e-28
Identities = 64/82 (78%), Positives = 68/82 (82%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGKVRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KG
Sbjct: 36 SKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKG 95
Query: 189 LIKQVVQHHGQVIYTRATKGDD 254
LIK V +H QVIYTR TKG D
Sbjct: 96 LIKLVSKHRAQVIYTRNTKGGD 117
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 103 bits (248), Expect = 5e-21
Identities = 46/78 (58%), Positives = 63/78 (80%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGKV+DK NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L ++G
Sbjct: 28 SKGKVKDKANNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEG 87
Query: 189 LIKQVVQHHGQVIYTRAT 242
LIK+VV HH Q+IYTRAT
Sbjct: 88 LIKRVVHHHAQLIYTRAT 105
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 102 bits (244), Expect = 2e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 490
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 102 bits (244), Expect = 2e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 490
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 102 bits (244), Expect = 2e-20
Identities = 47/78 (60%), Positives = 62/78 (79%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGK ++K+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +G
Sbjct: 155 SKGKQKEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRG 214
Query: 189 LIKQVVQHHGQVIYTRAT 242
LI+ V H Q IYTRAT
Sbjct: 215 LIRMVSVHSSQQIYTRAT 232
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 102 bits (244), Expect = 2e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 490
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 102 bits (244), Expect = 2e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 490
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 79.8 bits (188), Expect = 9e-14
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 KGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGL 191
K K +DK N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL L E+ L
Sbjct: 28 KVKTKDKANHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKL 87
Query: 192 IKQVV-QHHGQVIYTRA 239
IK V QHH Q +YT+A
Sbjct: 88 IKPVCDQHHAQRLYTKA 104
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 77.4 bits (182), Expect = 5e-13
Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Frame = +3
Query: 351 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 509
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 77.4 bits (182), Expect = 5e-13
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGK +DK N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L + KG
Sbjct: 29 SKGKQKDKANHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKG 88
Query: 189 LIKQV-VQHHGQVIYTRA 239
+IK V Q HGQ+IYT+A
Sbjct: 89 IIKPVGEQTHGQMIYTKA 106
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 75.8 bits (178), Expect = 2e-12
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+K ++D+ + V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL L ++G
Sbjct: 28 SKKSMKDRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEG 87
Query: 189 LIKQVVQHHGQVIYTRATKGD 251
+IK + +H Q IYTRAT +
Sbjct: 88 IIKPISKHSKQAIYTRATASE 108
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 74.1 bits (174), Expect = 5e-12
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KG+ R+ L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L +L +
Sbjct: 28 SKGQSREALQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREK 87
Query: 189 LIKQVVQHHGQVIYTR 236
LI+ V +YTR
Sbjct: 88 LIRLVSCSSKTRVYTR 103
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 484
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
AK V++KLNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L +K
Sbjct: 31 AKTTVKEKLNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKE 90
Query: 189 LIKQV-VQHHGQVIYTRATK 245
LI V V +H +V ++R+ K
Sbjct: 91 LIVPVKVDYHIRV-FSRSDK 109
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 63 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYT 233
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 62.1 bits (144), Expect = 2e-08
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKG 188
+KGK+ DKLNNQVLFD T RL++RGSLAR AL EL KG
Sbjct: 34 SKGKIWDKLNNQVLFDNAT---------------------RLEIRGSLARAALQELLGKG 72
Query: 189 LIKQVVQHHGQVIYTRATKGDD 254
LIK V +H +VIYTR TK D
Sbjct: 73 LIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_Q8ILN8 Cluster: Ribosomal protein S25, putative; n=3;
Plasmodium|Rep: Ribosomal protein S25, putative -
Plasmodium falciparum (isolate 3D7)
Length = 135
Score = 60.1 bits (139), Expect = 8e-08
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 KGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGL 191
KGK ++KLN+ V DK + K+ E K+ITP+ ++E+ KV S+AR + L +K L
Sbjct: 59 KGKNKEKLNHAVFIDKSLHSKIL-ECKNMKVITPSAIAEKYKVNLSVARAVINHLADKKL 117
Query: 192 IKQV-VQHHGQVIYTR 236
I +V VQ H Q +YT+
Sbjct: 118 IAEVCVQSHSQKLYTK 133
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 56.8 bits (131), Expect = 7e-07
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 12 KGKVRDKLNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELREKG 188
KG+ +DKLNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + + G
Sbjct: 96 KGRAKDKLNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSG 155
Query: 189 LIKQV-VQHHGQVIYT 233
L+ Q+ Q I+T
Sbjct: 156 LLVPAGDQNSKQYIFT 171
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 54.4 bits (125), Expect = 4e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 353 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 478
LA +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +2
Query: 362 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 490
VL R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 362 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 484
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.052
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 440 WRNSEEARTDRPSQQLR 490
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.1 bits (87), Expect = 0.16
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -3
Query: 490 AQLLGRAIGAGLFAITPAGERG 425
AQLLGRAIGAGLFAITP E G
Sbjct: 17 AQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 42 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 221
QVL D+ ++ + KEV ++ITP ++ + ++ S+A + L L+E+G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 222 VIYTRATK 245
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.64
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +3
Query: 42 QVLFDKPTYEKLYKEVPQYK---LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 212
+VLF + + YK V +Y L T +ER+K+R L + L ++ + Q
Sbjct: 169 KVLFSRRSLSYYYKLVGKYNKGILDTKKYKNERIKLRNLLYKINLRNATKRETSSEETQG 228
Query: 213 HGQVIYTRATKGDDQSHXXXXXXXXXXXTRX--GARYPIRPIVSRIT 347
R D+ + R GARYPIRPIVSRIT
Sbjct: 229 LNNKTRNREINILDKLYVRNEFNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 362 VLQRRDWENPGVTQLNRLAAHPP 430
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 374 RDWENPGVTQLNRLAAHPPFASWRNSEEA 460
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 35.5 bits (78), Expect = 2.0
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +3
Query: 9 AKGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 176
+K K ++K NNQ+ +K Y+K+ E+ + K ++ +S + +++ SL ++ + L
Sbjct: 10 SKVKNKEKSNNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_Q6E6G6 Cluster: Small subunit ribosomal protein S25e; n=1;
Antonospora locustae|Rep: Small subunit ribosomal
protein S25e - Antonospora locustae (Nosema locustae)
Length = 126
Score = 35.5 bits (78), Expect = 2.0
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +3
Query: 12 KGKVRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGL 191
+GK R+ + V + + K+ ++V + L+T V+E+ + +A++ L L G+
Sbjct: 29 QGKTREAVRRSVTVEADVFSKIERDVAKASLVTAPSVAEKFNLNVGVAQKILEHLCAGGV 88
Query: 192 IKQVVQHHGQVIYTRATK 245
+ + ++ +Y+RA K
Sbjct: 89 LCCLSRNSRLRLYSRAQK 106
>UniRef50_UPI00006CAF51 Cluster: hypothetical protein
TTHERM_00686230; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00686230 - Tetrahymena
thermophila SB210
Length = 254
Score = 35.1 bits (77), Expect = 2.6
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 12 KGKVRDKLNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRG 146
KGK +DK+N+ V +K E + + K++T + V E+LKV G
Sbjct: 50 KGKAKDKVNHAVFIEKKNVESIINNPSKVGKVLTVSTVVEKLKVNG 95
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 35.1 bits (77), Expect = 2.6
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 901 ICKXLGPVPFXFSXXFLAXFAGFPPXSFKSGAP 803
+ L P PF F FLA FAGFP + G P
Sbjct: 24 LASALAPAPFAFFPSFLATFAGFPRQALNRGLP 56
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 34.7 bits (76), Expect = 3.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 371 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRX*MANGNCK 517
+ DWENP V Q+NRL A S+ E+A T R Q NG K
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALT-RDRNQSTIQSLNGQWK 78
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 34.3 bits (75), Expect = 4.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 362 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 469
+L +DW+NP + + + H P S+R +EAR D
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +3
Query: 69 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIY 230
E+ KEV + + +TP +++++ V+ S+ARR L L E+G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_Q5GSK6 Cluster: Uncharacterized homolog of
invasion-associated protein B; n=4; Wolbachia|Rep:
Uncharacterized homolog of invasion-associated protein B
- Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 165
Score = 33.5 bits (73), Expect = 7.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 556 KSAHFLTNRAEIGKIPYKSKE*TEIGLSVVPVWNKSPLLKNVDSNVK 696
KS H+ TNR + Y K+ E+ ++ ++K P++ N+D +K
Sbjct: 53 KSEHYTTNRKPYVMVSYVDKKADEVSVTSGFQYDKEPIVLNIDKKIK 99
>UniRef50_O52852 Cluster: Bpu10I restriction endonuclease beta
subunit; n=1; Bacillus pumilus|Rep: Bpu10I restriction
endonuclease beta subunit - Bacillus pumilus (Bacillus
mesentericus)
Length = 288
Score = 33.5 bits (73), Expect = 7.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 618 IDRDRVECCSSLEQESTIKERGLQRQXAKNRLIXAMAHYVNHHPNQVFW 764
ID + C +S+ + + +K++GL L+ + H V H N+V+W
Sbjct: 225 IDEVFILCKASVGERTALKKKGLPPHKLDENLMVELFHMVERHLNRVWW 273
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 33.5 bits (73), Expect = 7.9
Identities = 13/44 (29%), Positives = 30/44 (68%)
Frame = +3
Query: 66 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 197
Y+++ +EV + +TP +++E+ + SLAR+ L L ++G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 920,230,906
Number of Sequences: 1657284
Number of extensions: 18460893
Number of successful extensions: 40862
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40851
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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