Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0557.Seq
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.9  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   3.9  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   5.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   6.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   6.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   6.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   6.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.0  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 223 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 116
           G  P      ++ R W GV+   KR  P   S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 247 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 140
           +P  S++ G++      P +   WTG V  RK+  P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 517 ATVGRAIGAGLFAITPAGERGMC 449
           ATVG+++ +G    TP+G  G C
Sbjct: 19  ATVGQSLNSGDPCQTPSGTAGTC 41


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 238 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 116
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 238 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 116
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 238 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 116
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 81  PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -1

Query: 391 DGQ*IVIRLTIGRIGYRAPPSRSYLALDGVYHPLR 287
           +GQ + +   + ++G+  PP R  +A D  +  +R
Sbjct: 214 NGQIVRLGSMVKKLGHDVPPERQLVATDAEWKEMR 248


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 572 REF*QNINAYNLPFAIQVRNCWKGDRCGPLRYYASWRKGDVLQ 444
           R+   ++NA+   F  +VR C + +R   LRY     K D +Q
Sbjct: 38  RDLNADVNAFQRKFVSEVRRCDEMER--KLRYVEGEVKKDSVQ 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,699
Number of Sequences: 2352
Number of extensions: 19387
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)