Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0552.Seq
         (920 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    69   2e-10
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.089
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    40   0.089
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.48 
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    37   0.83 
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   1.5  
UniRef50_A4FQV2 Cluster: Secreted trypsin-like serine protease; ...    34   4.4  
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    34   5.9  
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    34   5.9  
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    34   5.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 68.5 bits (160), Expect = 2e-10
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = +2

Query: 254 SSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRA 433
           +SFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR 
Sbjct: 41  TSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRV 100

Query: 434 GSG 442
           GSG
Sbjct: 101 GSG 103


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.089
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 385 PRKSPVSLFFVTTSPCREW 441
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 39.9 bits (89), Expect = 0.089
 Identities = 21/39 (53%), Positives = 22/39 (56%)
 Frame = +3

Query: 726 HWAVGFYKVRDWENLGLPNLIALQXXPFSPXGGXSXXAR 842
           HW   FY V   + L LPNLIALQ  P SP G  S  AR
Sbjct: 5   HWP-SFYNVVTGKTLALPNLIALQHIPLSPAGVISEEAR 42



 Score = 36.3 bits (80), Expect = 1.1
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +1

Query: 742 FTKFVTGKTWGYPT*SPCRXXPFRXLGVXAXRPATDXPSQXFXPLEWGMA 891
           F   VTGKT   P     +  P    GV +    TD PSQ    L+W MA
Sbjct: 9   FYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMA 58


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 37.5 bits (83), Expect = 0.48
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +2

Query: 422 PPRAGSG*FARLLPSLDVVAVSQAPSP 502
           PP+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAPSP 72



 Score = 34.3 bits (75), Expect = 4.4
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 295 SWNYRGCWHQTCP 333
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 36.7 bits (81), Expect = 0.83
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +2

Query: 455 LLPSLDVVAVSQAPSPE 505
           LLPSLDVVAVSQAPSPE
Sbjct: 167 LLPSLDVVAVSQAPSPE 183


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 582 MSALSTFDGSFCDYHG 535
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_A4FQV2 Cluster: Secreted trypsin-like serine protease;
           n=1; Saccharopolyspora erythraea NRRL 2338|Rep: Secreted
           trypsin-like serine protease - Saccharopolyspora
           erythraea (strain NRRL 23338)
          Length = 283

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +1

Query: 298 WNYRGCWHQTCPPI--VPR*NI*SVLIPITRPRKSPVSLFFVTTSPCREWVICAPAAFLG 471
           W + G W  T PP   +PR +    ++ + RP   P +L   T      +   APA  LG
Sbjct: 109 WKHPG-WQHTPPPPGELPRMHPDVAVVTLDRPMPFP-ALPLATVEDAALYRAGAPARILG 166

Query: 472 CGSRFSGSLSGIDPDSPLPVTTMVVAETTI 561
            G          DP  PLP T+ ++ +  +
Sbjct: 167 WGVTDPDKTYPPDPGEPLPTTSRILQQAQL 196


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 20/41 (48%), Positives = 22/41 (53%)
 Frame = +2

Query: 767 PGVTQLNRLAEXPLFAXWG*XXXGPQXIXLPKXLXXXNGEW 889
           PGVTQLNRLA  P FA W       +     + L   NGEW
Sbjct: 80  PGVTQLNRLAAHPPFASWR-NSEEARTDRPSQQLRXLNGEW 119


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = +2

Query: 767 PGVTQLNRLAEXPLFAXWG*XXXGPQXIXLPKXLXXXNGEW 889
           PGVTQLNRLA  P FA W       +     + L   NGEW
Sbjct: 38  PGVTQLNRLAAHPPFASWR-NSEEARTDRPSQQLRSLNGEW 77


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = +2

Query: 767 PGVTQLNRLAEXPLFAXWG*XXXGPQXIXLPKXLXXXNGEW 889
           PGVTQLNRLA  P FA W       +     + L   NGEW
Sbjct: 20  PGVTQLNRLAAHPPFASWR-NSEEARTDRPSQQLRSLNGEW 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,576,353
Number of Sequences: 1657284
Number of extensions: 17725542
Number of successful extensions: 36047
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36042
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)