Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0549.Seq
(950 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 57 2e-08
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 54 2e-07
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 47 2e-05
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 47 3e-05
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 46 4e-05
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 46 6e-05
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173... 44 2e-04
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 42 5e-04
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 41 0.002
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 41 0.002
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 39 0.007
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 39 0.007
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 34 0.14
02_02_0063 + 6481568-6481570,6481922-6482470 30 2.4
08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,302... 29 4.1
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 29 4.1
12_01_0144 - 1097579-1097604,1097940-1098127,1098567-1098720,109... 29 5.4
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266... 29 5.4
11_04_0417 - 17438023-17438331,17438706-17438795 29 7.2
01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869 29 7.2
06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,781... 28 9.5
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = -3
Query: 501 LDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAK 331
LD+W PEQV +Q MGN ++ + +EA LP ++ R + +E+FIRAKY K++I +
Sbjct: 73 LDTWLPEQVAFIQSMGNEKSNSYWEAELPPNYDR----VGIENFIRAKYEDKRWIPR 125
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC +KG + G C+GIHR+LGVHISKV+
Sbjct: 31 CADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVR 69
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAK 331
V LD WT +++ S+ ++G NS A A+YEA LP + +P D S E RA + + KY +
Sbjct: 864 VTLDEWTDDEINSMLEVGGNSYANAIYEAFLPGGYHKPHPDSSQEE--RADFIRSKYELQ 921
Query: 330 EWVPPQL 310
E++ P L
Sbjct: 922 EFLKPSL 928
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISI 495
+C DC + G C+GIHR+LG HISKV +S+++
Sbjct: 823 ICADCSSPDPKWASANIGVFICLKCSGIHRSLGTHISKV-LSVTL 866
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLE---SFIRAKYXQKKY 340
V LD WT EQV L G N+ +YEA +P+++ +P+ D S E F+R KY +++
Sbjct: 105 VKLDEWTDEQVDILADSGGNAAVNMIYEAFIPENYMKPRQDCSSEGRNDFVRRKYELQQF 164
Query: 339 IA 334
++
Sbjct: 165 LS 166
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1
Query: 638 ATXLCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKV 513
A +C DC A + FG C+G HR+LGVHISKV
Sbjct: 61 ANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKV 102
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK-MSISIR 492
+C DC A + G + C+G+HRNLGVHISKV+ +++ +R
Sbjct: 424 ICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVR 470
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 528 SHLQSEDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMS 382
S ++S +++ W P + Q +GN+ A ++E LP S D S
Sbjct: 460 SKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNS 508
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKV---KMSISIRGLQSKW 474
+CVDC + + G + C+G+HRNLGVHISK+ + S GL + W
Sbjct: 464 ICVDCGSMEPDWASLNLGALLCIECSGVHRNLGVHISKLISTTLFRSAHGLDTAW 518
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAK 331
V LD W+ + S+ ++G NS A ++YE+ LP +P+ D ++E R K+ + KY +
Sbjct: 6 VTLDDWSDSDIDSMLEIGGNSYANSIYESFLPKDHPKPKMDSTME--YRTKFIRAKYETQ 63
Query: 330 EWVPPQL 310
+++ P L
Sbjct: 64 DFLKPSL 70
>10_08_1021 -
22315487-22315493,22317051-22317154,22317227-22317328,
22317623-22317745,22318038-22318094,22318498-22318758,
22318948-22319377,22320168-22320286,22320515-22320595
Length = 427
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC+AK T + +G C+ +HR+LGVH+S V+
Sbjct: 28 MCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVR 67
Score = 35.1 bits (77), Expect = 0.083
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 504 NLDSWTPEQVVSLQQMGNSRARAVYE 427
NLDSWTPEQ+ + GN+RA+A ++
Sbjct: 70 NLDSWTPEQLKMMVYGGNNRAQAFFK 95
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC AK T + +G C+ +HR+LGVHI+ V+
Sbjct: 24 MCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVR 63
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 504 NLDSWTPEQVVSLQQMGNSRARAVYE 427
NLDSWTP+Q+ + GN+RA A ++
Sbjct: 66 NLDSWTPDQLKMMAFGGNNRAHAFFK 91
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 40.7 bits (91), Expect = 0.002
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C +C + + G + C+G HRNLGVHISKV+
Sbjct: 368 CAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVR 406
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISI 495
+C DC A G C+G+HR+LG HISKV +S+++
Sbjct: 25 ICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKV-LSVTL 68
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAK 331
V LD W+ ++ ++ ++G NS A A+YE LP + +P D + E R K+ ++
Sbjct: 66 VTLDQWSDNEIDNVIEVGGNSHANAIYETFLPQNHSKPHPDSTQEE--REKFISSQHFQV 123
Query: 330 EWVP 319
+ +P
Sbjct: 124 QGMP 127
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
CVDC + + +G C+G HR LGVHIS V+
Sbjct: 21 CVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVR 59
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 38.7 bits (86), Expect = 0.007
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = -3
Query: 513 EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLP-DSFRRPQNDM--SLESFIRAKYXQKK 343
+ V++ +T ++V SL+Q GN RAR +Y + R P N + FIRA Y KK
Sbjct: 61 KSVSMAKFTTQEVRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKK 120
Query: 342 Y 340
Y
Sbjct: 121 Y 121
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMS 504
C++C++ G F SC+GIHR + V M+
Sbjct: 26 CINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRVKSVSMA 66
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = -3
Query: 513 EDVNLDSWTPEQVVSLQQMGNSRARAVY-------EANLPDSFRRPQNDMSLESFIRAKY 355
+ V++ ++T ++V +LQ GN RAR + + LPDS N SL FI+A Y
Sbjct: 64 KSVSMSTFTTQEVEALQNGGNQRARESFLKEFDAQKMRLPDS----SNVDSLREFIKAVY 119
Query: 354 XQKKY 340
+++Y
Sbjct: 120 VERRY 124
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMS 504
C++C+ G F SC+GIHR + V MS
Sbjct: 29 CINCNGLGPQYVCTSFWTFVCISCSGIHREFTHRVKSVSMS 69
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 168 AYRNQNLQSVLSSVGARXXXTRTPAKRPTVRRSPRLGHRQTGPR 37
A R L ++ ++VG+R R PA RP + R R+ GPR
Sbjct: 137 ATRPGRLVAMAATVGSRREERRGPAGRPAPAEAVRTRRRRRGPR 180
>08_01_0343 -
3025577-3025810,3026428-3026505,3026630-3026748,
3027566-3027645,3028034-3028107,3028536-3028620,
3028704-3028789,3028968-3029038,3029126-3029207,
3029490-3029531,3029552-3029584,3029699-3029794,
3030163-3030414,3030970-3031149,3032079-3032119,
3032341-3032470,3032504-3032606,3032686-3032773,
3033151-3033304,3033688-3033739,3033815-3033894,
3034478-3034789,3034886-3034955,3035033-3035100,
3035405-3035678,3036408-3036580,3037036-3037128,
3037228-3037443
Length = 1121
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 434 TARARLFPICCSDTTCSGVHESRLTSSLWRCEHPDSDGSQRRNXQ 568
+++ARL I C C + +L +SLW P+SD Q+R Q
Sbjct: 390 SSKARLAAILCIQDICRA--DPKLLTSLWPLLLPESDVLQQRKYQ 432
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMS 504
C++C++ G F SC+GIHR + + M+
Sbjct: 27 CINCNSLGPQYVCTSFSTFVCVSCSGIHREFTHRVKSISMA 67
>12_01_0144 -
1097579-1097604,1097940-1098127,1098567-1098720,
1098825-1099092,1099310-1099550,1099669-1099833,
1099898-1100298
Length = 480
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -3
Query: 558 LRWDP---SESGCS-HLQSEDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDS 409
L W P S+SG + HL S+D+ S P Q+ N AR +Y PDS
Sbjct: 124 LGWKPCLYSQSGVTTHLGSDDMQEYSSRPPQIDQSDLTNNCSARQIYLTFPPDS 177
>03_01_0336 -
2659349-2659486,2659607-2659758,2660257-2660365,
2660459-2660563,2660874-2660957,2661072-2662745
Length = 753
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -2
Query: 490 DSRASGVATANGKQPRPGRVRGELTRLVQTS--TKRHVLGIVHTRQIRTEEIHCEGVGAP 317
D + T K G G+ +R V S T+ HV + + + I +GVG
Sbjct: 44 DCKEERCDTNKRKGSAMGEDVGDDSRSVDRSHETEVHVFNDKQDKAVEIKNILHDGVGQS 103
Query: 316 AAAQSQLG*RNRRRDG 269
Q QLG N RR+G
Sbjct: 104 DYGQRQLGLDNERRNG 119
>11_04_0417 - 17438023-17438331,17438706-17438795
Length = 132
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -3
Query: 546 PSESGCSHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESF 370
P SG S + + L++W +Q+ Q G AR V A LPD R E+
Sbjct: 33 PGRSGSSTVTFYTTMELNAWEIQQLNHFLQEGQGIAREVLRAKLPDDIVRDVGRTRREAL 92
Query: 369 IRAKY 355
+ Y
Sbjct: 93 VLRLY 97
>01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869
Length = 400
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 106 PDTSKTSNGPQISSAWTPPNRTPCPATILVPN 11
PD +T ++SAW+ R+P PAT+ VP+
Sbjct: 38 PD-GRTDASRALASAWSAACRSPEPATVYVPD 68
>06_01_1005 -
7810210-7810907,7811005-7811080,7811180-7811368,
7811507-7811728,7811906-7812004,7812112-7812192,
7812384-7812679,7812777-7813116,7813221-7813284,
7813511-7813735,7816958-7817244
Length = 858
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 286 FFIPVDFGQLRGHPLLRNVFLLXVFG 363
FF P++FG RG P RN+F L + G
Sbjct: 114 FFTPLEFGFFRGLP--RNLFFLDIAG 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,992,889
Number of Sequences: 37544
Number of extensions: 506761
Number of successful extensions: 1445
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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