Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0549.Seq
(950 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17655| Best HMM Match : ArfGap (HMM E-Value=0.015) 51 1e-06
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 33 0.26
SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.45
SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 31 1.8
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0) 30 2.4
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 30 3.2
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.2
SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.2
SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15) 29 4.2
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.2
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 5.5
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 29 7.3
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 28 9.6
SB_39407| Best HMM Match : TIG (HMM E-Value=0) 28 9.6
SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06) 28 9.6
>SB_17655| Best HMM Match : ArfGap (HMM E-Value=0.015)
Length = 401
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 522 LQSEDVNLDS--WTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQ 349
L+ V+L S W Q R + FRRPQ D ++E+FIR KY Q
Sbjct: 65 LELGSVHLHSLRWNSSQFRGTHLKSKIRQLGFVDGRANGDFRRPQTDSAMEAFIRKKYEQ 124
Query: 348 KKYIAKEWVPPQ 313
KK+I K+ +PPQ
Sbjct: 125 KKFIKKDGLPPQ 136
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = -3
Query: 513 EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQ-NDMSL--ESFIRAKYXQKK 343
+ + LD+WT E++ + + GN ++ A++ N+P +RRP+ D + E +IRAKY +K+
Sbjct: 58 KSLRLDTWTDERLQFMIENGNEKSNAIWAKNVPICYRRPKCTDPHVLREQWIRAKYERKE 117
Query: 342 YI 337
+I
Sbjct: 118 FI 119
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC AK G +C+G+HRNLG IS VK
Sbjct: 20 CADCGAKHPEWASASKGIFICITCSGVHRNLGTQISVVK 58
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 41.9 bits (94), Expect = 7e-04
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC +K T G + C+G+HR +GVH+S+V+
Sbjct: 101 CADCTSKDPTWLSTNLGVLTCIECSGVHRGMGVHVSRVQ 139
>SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRR---PQNDMSLESFIRAKYXQKKYI 337
+ LD+W PE + + ++GNS ++YEA + ++ N E++I++KY +++
Sbjct: 311 LTLDAWEPEHLKLMSELGNSLINSIYEAKIAGDHKKINHLSNRSDREAWIKSKYIYHRFV 370
Query: 336 A 334
+
Sbjct: 371 S 371
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 34.3 bits (75), Expect = 0.15
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 483 EQVVSLQQMGNSRARAVYEANLPDSFR-RPQNDMS-LESFIRAKYXQKKY 340
E VV + ++GN A + E +PD R RP D + FI AKY KKY
Sbjct: 870 EIVVLMVKIGNENANKLLEFKIPDDDRIRPDADSAKRREFICAKYEYKKY 919
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GKTL + Q RL +P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLSVTQLNRLAAHP 32
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNPLLP 926
S T HWPSF +V GKTL L L+ PL P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLIALQHIPLSP 35
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNPLLP 926
S T HWPSF +V GKTL L L+ PL P
Sbjct: 80 SRITIHWPSFYNVV-TGKTLALPNLIALQHIPLSP 113
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNPLLP 926
S T HWPSF +V GKTL L L+ PL P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLIALQHIPLSP 35
>SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 32.7 bits (71), Expect = 0.45
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 837 HWPSFLXIVKLGKTLXLAQFXRLEQNPLLPTLGKN 941
HWPSF +V GKTL L L+ PL P G+N
Sbjct: 5 HWPSFYNVV-TGKTLALPNLIALQHIPLSPA-GRN 37
>SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 837 HWPSFLXIVKLGKTLXLAQFXRLEQNP 917
HWPSF +V GKTL + Q RL +P
Sbjct: 5 HWPSFYNVV-TGKTLGVTQLNRLAAHP 30
>SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 837 HWPSFLXIVKLGKTLXLAQFXRLEQNPLLP 926
HWPSF +V GKTL L L+ PL P
Sbjct: 62 HWPSFYNVV-TGKTLALPNLIALQHIPLSP 90
>SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 31.5 bits (68), Expect = 1.0
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Frame = -1
Query: 683 GSLSEYISANA*XXKATXLCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKM- 507
G+L+ +++ A A C ++G T GF GY C H + VH+
Sbjct: 79 GALARHVNT-AGTASADTRCQHRCSRGPTSGFPPEGYAHWRVC---HPRVDVHLKACHFF 134
Query: 506 SISIRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLR 333
S + Q + + + T+ P TR Y R + + WNR N ++ TLR
Sbjct: 135 SNQVVAPQMEGPQGMERITSPEQPATRTKYSGRVEAGRRLAKWNRL---NRAKKETLR 189
>SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 837 HWPSFLXIVKLGKTLXLAQFXRLEQNPLLP 926
HWPSF +V GKTL L L+ PL P
Sbjct: 57 HWPSFYNVV-TGKTLALPNLIALQHIPLSP 85
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3
Query: 513 EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIA 334
+ +++ S+TP+++ LQ GN + + L +S P+ + E ++ + +KY
Sbjct: 65 KSISMTSFTPQEIEYLQGAGNEVCKKTW-LGLWNSANNPEPESRDEQKVK-DFMIQKYER 122
Query: 333 KEW-VPPQLPKV 301
+ W +PPQ V
Sbjct: 123 RRWYIPPQQASV 134
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNL 534
C DC +G T M G SC+GI R L
Sbjct: 28 CFDCGQRGPTYVNMTIGSFVCTSCSGILRGL 58
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GKTL L L+ +P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLIALQLHP 32
>SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0)
Length = 1649
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 105 RTPAKRPTVRRSPRLGHRQTGPRAQQRSSCRIRHE 1
+TP + PT +PRLG+ + PR QRSS +R +
Sbjct: 1559 QTPVQTPT---APRLGYDEMMPREIQRSSAALRED 1590
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNPL 920
S T HWPSF +V GKTL L L PL
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLFDLRHIPL 33
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GKTL L L+ P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLIALQHIP 32
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GKTL L L +P
Sbjct: 2 SRITIHWPSFYNVV-TGKTLALPNLIALAAHP 32
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 935 TQXWQKGILFKXXKLG*XQGFPQFNDX*KXRPVXCXRT 822
T ++G+ K KLG +GFP +D K RPV C T
Sbjct: 56 TPAGERGMCCKAIKLGNARGFPS-HDGEKRRPVNCNTT 92
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15)
Length = 263
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GK + Q RL +P
Sbjct: 2 SRITIHWPSFYNVV-TGKNTGVTQLNRLAAHP 32
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GK + Q RL +P
Sbjct: 2 SRITIHWPSFYNVV-TGKNTGVTQLNRLAAHP 32
>SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YFENQSRRNNIRVSGIP 125
Query: 317 RS 312
S
Sbjct: 126 ES 127
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF ++ L KT + Q RL +P
Sbjct: 2 SRITIHWPSFYNVM-LAKTPGVTQLNRLAAHP 32
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -3
Query: 492 WTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAKEWVPPQ 313
W VS++Q+ N + + + NL + +++M E+ + KKY+ + PP+
Sbjct: 209 WDTRTDVSIEQIKNHKPHDISDDNLIPLRKPDRDEMFRENMKEYEEQAKKYVKPKKGPPK 268
Query: 312 L 310
L
Sbjct: 269 L 269
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 822 SPXTXHWPSFLXIVKLGKTLXLAQFXRLEQNP 917
S T HWPSF +V GK + Q RL +P
Sbjct: 2 SRITIHWPSFYNVV-TGKNPGVTQLNRLAAHP 32
>SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 855
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 697 AKQLQDRCQNILVQMLKXXRQXNYAL-TVMQKVPRWASWNLGIFLXIPALGSIGIWVFTS 521
A+QLQ++CQ V + A TV Q V ++++ +G+ + G+W +
Sbjct: 385 ARQLQEKCQEQNVDLYSTYVDLTKAFDTVKQNVDLYSTY-VGLTKAFDTVSREGLWKIMA 443
Query: 520 PK*RCQSRFVD 488
K C S+F++
Sbjct: 444 -KFGCPSKFIN 453
>SB_39407| Best HMM Match : TIG (HMM E-Value=0)
Length = 1710
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -3
Query: 573 YSCXFLRWDPSESGCSHLQSEDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQ 394
Y+ W P+ S L++ +LD+ V++ Q N+R+R VY+ F P+
Sbjct: 346 YAGEMTTWLPTNISDSDLEAALNSLDALRDMGNVTVTQSSNNRSR-VYKVGF--VFENPE 402
Query: 393 NDMSLE 376
+ MSLE
Sbjct: 403 DAMSLE 408
>SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06)
Length = 563
Score = 28.3 bits (60), Expect = 9.6
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 497 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTXRRNTLRRSGCP 318
+ GL++ +++ E GP ++ +T S+V K Y N RRN R SG P
Sbjct: 37 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNKRVSGIP 93
Query: 317 RSCPKS-TGIKK*TKRWIDRK-GKEVG 243
S +S + K+ I K G E+G
Sbjct: 94 ESPGESWADSEAKVKKAIQTKLGLEIG 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,044,835
Number of Sequences: 59808
Number of extensions: 552844
Number of successful extensions: 1802
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2788625034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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