Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0549.Seq
         (950 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    27   1.1  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    26   1.5  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    26   1.5  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    26   1.5  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.5  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   5.9  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.9  

>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 417 VSSPRTRPGRGCFPFAVATPLALESTNRD*HLHFGDVNTQ 536
           +S P+T P  G  P+ +   L  E      H H+GD N +
Sbjct: 99  LSIPKTDPTSGKHPYILGGKLENEYELEGLHFHWGDKNNR 138


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 611 AKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISIRGLQSK 477
           A G T+  +  GYI +  CAG  + LG  +S +  SI +RG   +
Sbjct: 216 APGRTL-LVGAGYIGL-ECAGFLKGLGYDVSVMVRSILLRGFDQQ 258


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 611 AKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISIRGLQSK 477
           A G T+  +  GYI +  CAG  + LG  +S +  SI +RG   +
Sbjct: 192 APGRTL-LVGAGYIGL-ECAGFLKGLGYDVSVMVRSILLRGFDQQ 234


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 611 AKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISIRGLQSK 477
           A G T+  +  GYI +  CAG  + LG  +S +  SI +RG   +
Sbjct: 189 APGRTL-LVGAGYIGL-ECAGFLKGLGYDVSVMVRSILLRGFDQQ 231


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 103 DTSKTSNGPQISSAWTPPNRTPCPA 29
           DTSKTS G Q+ ++  P  R P  A
Sbjct: 14  DTSKTSVGKQLPASGIPTLRAPMAA 38


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
 Frame = -3

Query: 582 IWVYSCXF---LRWDPSESG---CSHLQSEDVNLDSWTPEQVVSLQQMGNSRARAVYEAN 421
           +WV    F   LRWDP E G     ++ SE +    W P+ V+     GN     + +A 
Sbjct: 80  LWVKQKWFDYKLRWDPEEYGGVEMLYVPSEQI----WLPDIVLYNNWDGNYEVTLMTKAT 135

Query: 420 L 418
           L
Sbjct: 136 L 136


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -1

Query: 617 CDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVKMSISIRGLQSKW 474
           C  K S  G  + G +   +   + R+LG H S+    + ++  + +W
Sbjct: 571 CLLKKSLYGLKQAGRVWNQTITEVLRSLGFHSSEADPCLFVKNKRDRW 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 929,896
Number of Sequences: 2352
Number of extensions: 18603
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)