Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0549.Seq
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 92 5e-19
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 44 2e-04
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 44 2e-04
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 44 2e-04
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 44 2e-04
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 44 2e-04
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 42 9e-04
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 38 0.014
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 35 0.074
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 35 0.074
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 35 0.074
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 35 0.074
Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 8.5
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 8.5
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 92.3 bits (219), Expect = 5e-19
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = -3
Query: 507 VNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYXQKKYIAKE 328
VNLDSWTPEQV +++ MGN +AR VYE +LP FRRP ND +E FIR+KY QK+YI ++
Sbjct: 72 VNLDSWTPEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKRYILRD 131
Query: 327 WVPPQLPKVNWDKEIDE 277
+V P++ K + +
Sbjct: 132 FVYPRVDASQLPKSLSQ 148
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = -2
Query: 694 KQLQDRCQNILVQMLKXXRQXNYALTVMQKVPRWASWNLGIFLXIPALG 548
K+ Q+R Q L+ MLK + Y K PRWA+WNLG+F+ I G
Sbjct: 10 KEEQERLQGFLLDMLKE-EENKYCADCQAKTPRWAAWNLGVFICIRCAG 57
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/39 (53%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC AK G CAGIHRNLGVHISKV+
Sbjct: 32 CADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVR 70
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC S + G I C+GIHRNLG HISKV+
Sbjct: 633 CADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVR 671
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 528 SHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYX 352
SH+ + LD W E + +Q +GN +A ++E L + R+P + S E + ++
Sbjct: 665 SHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREE--KERFI 722
Query: 351 QKKYIAKEWVPP 316
+KY+ K ++ P
Sbjct: 723 DRKYVQKAFLKP 734
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC S + G I C+GIHRNLG HISKV+
Sbjct: 681 CADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVR 719
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 528 SHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYX 352
SH+ + LD W E + +Q +GN +A ++E L + R+P + S E + ++
Sbjct: 713 SHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREE--KERFI 770
Query: 351 QKKYIAKEWVPP 316
+KY+ K ++ P
Sbjct: 771 DRKYVQKAFLKP 782
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC S + G I C+GIHRNLG HISKV+
Sbjct: 837 CADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVR 875
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 528 SHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYX 352
SH+ + LD W E + +Q +GN +A ++E L + R+P + S E + ++
Sbjct: 869 SHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREE--KERFI 926
Query: 351 QKKYIAKEWVPP 316
+KY+ K ++ P
Sbjct: 927 DRKYVQKAFLKP 938
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC S + G I C+GIHRNLG HISKV+
Sbjct: 837 CADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVR 875
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 528 SHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYX 352
SH+ + LD W E + +Q +GN +A ++E L + R+P + S E + ++
Sbjct: 869 SHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREE--KERFI 926
Query: 351 QKKYIAKEWVPP 316
+KY+ K ++ P
Sbjct: 927 DRKYVQKAFLKP 938
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C DC S + G I C+GIHRNLG HISKV+
Sbjct: 682 CADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVR 720
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 528 SHLQS-EDVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYX 352
SH+ + LD W E + +Q +GN +A ++E L + R+P + S E + ++
Sbjct: 714 SHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREE--KERFI 771
Query: 351 QKKYIAKEWVPP 316
+KY+ K ++ P
Sbjct: 772 DRKYVQKAFLKP 783
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 41.5 bits (93), Expect = 9e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
LC DC A+ T + +G C+ +HRNLGVH++ V+
Sbjct: 27 LCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVR 66
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 626 CVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
C +C+A + +G C+GIHR+LGVH+S V+
Sbjct: 22 CFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSFVR 60
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC + + G + C+G HR+LGV SKV+
Sbjct: 377 VCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVR 416
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC + + G + C+G HR+LGV SKV+
Sbjct: 461 VCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVR 500
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC + + G + C+G HR+LGV SKV+
Sbjct: 377 VCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVR 416
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 629 LCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISKVK 510
+C DC + + G + C+G HR+LGV SKV+
Sbjct: 461 VCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVR 500
>Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical
protein C44B9.1 protein.
Length = 954
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 635 TXLCVDCDAKGSTMGFMEFGYIPVXSCAGIHRNLGVHISK 516
T LC+ D++ +++ F E G++ S H+ L H S+
Sbjct: 328 TSLCLKLDSEQASITFREMGFVLCRSFQAFHKILNFHSSE 367
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 124 STXPXHPDTSKTSNGPQISSAWTPPNRTPC 35
S+ H TS T++ SAW NR PC
Sbjct: 520 SSENTHATTSGTTSAKGAGSAWQETNRAPC 549
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 124 STXPXHPDTSKTSNGPQISSAWTPPNRTPC 35
S+ H TS T++ SAW NR PC
Sbjct: 520 SSENTHATTSGTTSAKGAGSAWQETNRAPC 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,407,281
Number of Sequences: 27780
Number of extensions: 408442
Number of successful extensions: 1049
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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