Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0545.Seq
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 109 3e-24
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 78 1e-14
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 76 4e-14
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 76 4e-14
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 71 8e-13
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 70 2e-12
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 68 1e-11
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 68 1e-11
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 68 1e-11
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 68 1e-11
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 68 1e-11
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 66 4e-11
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 65 6e-11
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 65 6e-11
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 64 1e-10
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 63 2e-10
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 63 2e-10
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 62 4e-10
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 58 1e-08
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 57 1e-08
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 55 8e-08
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 54 1e-07
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 54 1e-07
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 54 2e-07
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 50 3e-06
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 47 2e-05
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 45 6e-05
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 43 3e-04
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 42 4e-04
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 42 4e-04
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 42 4e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 42 4e-04
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 40 0.002
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 40 0.002
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 40 0.003
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 39 0.004
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 35 0.089
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 35 0.089
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 34 0.16
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 34 0.16
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 31 0.83
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.83
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 29 3.3
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 29 3.3
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 29 4.4
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 109 bits (261), Expect = 3e-24
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFRTITS+Y GAH II+V D TDQ +F+NVKQ L+EIDRYAC+NVNKLLVGNKC
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKC 126
Query: 514 DLPLKR 497
DL KR
Sbjct: 127 DLTAKR 132
Score = 83.0 bits (196), Expect = 3e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARVGPPSTGAAPAG 333
L K+ V+ + YA QLGIPFLETSAK S NVEQAF+TMA+EIK+R+GP GA A
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQ-GAGGAP 186
Query: 332 HVKIDQGQPIDTGKS-SCC 279
V+I QP+ KS CC
Sbjct: 187 GVRITGSQPVQDKKSGGCC 205
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 77.8 bits (183), Expect = 1e-14
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFRTITS Y G H +++V D T+ SF NVK+ L+EI+ CD+V K+LVGNKC
Sbjct: 66 TAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIEN-NCDSVQKVLVGNKC 124
Query: 514 DLPLKRLSTLVQXSNMRN 461
+ +R +V S+ RN
Sbjct: 125 EENERR---VVLESDARN 139
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 503 KKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAA-EIKARVGPPSTGA 345
++VV S + YA+ + I F ETSAK NVE F + + + A++ P + +
Sbjct: 129 RRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLANPQSAS 182
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFRTIT+AY GA II+V D T++ SF N+K + I+ +A +V ++++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
Query: 514 DLPLKR 497
D+ +R
Sbjct: 124 DIEERR 129
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = -1
Query: 503 KKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV 366
++ V +Q A + G FLETSAK + N+++AF T+A +IK+++
Sbjct: 128 RREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFRTIT+AY GA II+V D T++ SF N+K + I+ +A +V ++++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
Query: 514 DLPLKR 497
D+ +R
Sbjct: 124 DIEERR 129
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = -1
Query: 503 KKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV 366
++ V +Q A + G FLETSAK + N+++AF T+A +IK+++
Sbjct: 128 RREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFRTIT+AY GA II+V D T++ SF N+K + I+ +A +V ++++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERF TIT++Y GA I++V D T+ SF N+ + L ID +A ++V K+++GNKC
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKC 124
Query: 514 DLPLKRL 494
D+ +R+
Sbjct: 125 DMSDRRV 131
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+RTIT+AY GA I++ D T++ SF++V+ +I Y+ +N +LVGNKC
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKC 137
Query: 514 DLPLKRLSTL 485
D+ +R+ ++
Sbjct: 138 DMDSERVVSM 147
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAF 399
+++VV +Q A+QLG+ F ETSAK + NV+ F
Sbjct: 141 SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+RTIT+AY GA I++ D T++ SF++V+ +I Y+ +N +LVGNKC
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKC 137
Query: 514 DLPLKRLSTL 485
D+ +R+ ++
Sbjct: 138 DMDSERVVSM 147
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAF 399
+++VV +Q A+QLG+ F ETSAK + NV+ F
Sbjct: 141 SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+RTIT+AY GA I++ D T++ SF++V+ +I Y+ +N +LVGNKC
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKC 137
Query: 514 DLPLKRLSTL 485
D+ +R+ ++
Sbjct: 138 DMDSERVVSM 147
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAF 399
+++VV +Q A+QLG+ F ETSAK + NV+ F
Sbjct: 141 SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+RTIT+AY GA I++ D T++ SF++V+ +I Y+ +N +LVGNKC
Sbjct: 92 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKC 151
Query: 514 DLPLKRLSTL 485
D+ +R+ ++
Sbjct: 152 DMDSERVVSM 161
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAF 399
+++VV +Q A+QLG+ F ETSAK + NV+ F
Sbjct: 155 SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 190
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+RTIT+AY GA I++ D T++ SF++V+ +I Y+ +N +LVGNKC
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKC 137
Query: 514 DLPLKRLSTL 485
D+ +R+ ++
Sbjct: 138 DMDSERVVSM 147
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAF 399
+++VV +Q A+QLG+ F ETSAK + NV+ F
Sbjct: 141 SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERF TIT++Y GA I++V D T+ SF N+ + L ID +A ++V K+++GNKC
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKC 124
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 65.3 bits (152), Expect = 6e-11
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
T G ERFRTIT +Y A+ I++ D T + SF ++++ ++++ ++A NV KLL+G KC
Sbjct: 66 TGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKC 125
Query: 514 DLPLKR 497
DL +R
Sbjct: 126 DLEDQR 131
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 443 LETSAKXSXNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQPIDTGK--SSCC 279
LETSAK + NV+ AF+ +A +K + +G ++ G G CC
Sbjct: 151 LETSAKGNVNVDNAFLELATILKRQYDQGVVEQGSSGTFQLGSGGTTALGSPWQRCC 207
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 65.3 bits (152), Expect = 6e-11
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC-DNVNKLLVGNK 518
TAG ERFRT+T +Y GA +I V D T + SF + ++E+D Y DN+ K++V NK
Sbjct: 67 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANK 126
Query: 517 CDLP 506
D+P
Sbjct: 127 IDMP 130
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC-DNVNKLLVGNK 518
TAG ERFRT+T +Y GA +I V D T + SF + ++E+D Y DN+ K++V NK
Sbjct: 40 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANK 99
Query: 517 CDLPLKRLSTLVQXSNMRNNW 455
D + R S ++NN+
Sbjct: 100 ID--MVRKSRFCSIFGLKNNF 118
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR++T++Y A +++V D ++ SF N + L +I Y + V LVGNKC
Sbjct: 59 TAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKC 118
Query: 514 DLP 506
DLP
Sbjct: 119 DLP 121
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 500 KVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAE-IKARVG 363
+ V K+ AE IPF+ETSAK NV++AF+ +A +K + G
Sbjct: 122 RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKYG 168
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR++T++Y A +++V D ++ SF N + L +I Y + V LVGNKC
Sbjct: 59 TAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKC 118
Query: 514 DLP 506
DLP
Sbjct: 119 DLP 121
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 500 KVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAE-IKARVG 363
+ V K+ AE IPF+ETSAK NV++AF+ +A +K + G
Sbjct: 122 RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKYG 168
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR+IT +Y AH I++V D + Q SF + + L EI+ YA V K+LVGNK
Sbjct: 63 TAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKV 122
Query: 514 D 512
D
Sbjct: 123 D 123
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNV-KQCLEEIDRYACDNVNKLLVGNK 518
TAG ER+RTI ++Y AH ++ V D T++ SF N+ K L+EI ++A N +LVGNK
Sbjct: 62 TAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNK 121
Query: 517 CDLPLKR 497
D+ +R
Sbjct: 122 ADMDQER 128
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 503 KKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV 366
++ VDF ++ A +LG+ E SAK N E+AF T+ A ++ R+
Sbjct: 127 ERKVDFDRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERI 172
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+R ITSAY GA ++V D ++ NV++ L+E+ +A N+ +LVGNK
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKS 126
Query: 514 DL 509
DL
Sbjct: 127 DL 128
Score = 36.3 bits (80), Expect = 0.029
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = -1
Query: 500 KVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARVGPPSTGAAPAGH--- 330
+ V K YAE+ + F+ETSA S NVE AF + EI V G G+
Sbjct: 132 RAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQGYGGG 191
Query: 329 -VKIDQGQPIDTGKSSCC 279
I D K CC
Sbjct: 192 SGTIIPSPASDPPKKQCC 209
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+ ++ Y GA I+V D T+Q SF K ++E+ R A N+ L GNK
Sbjct: 75 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKA 134
Query: 514 DLPLKR 497
D+ KR
Sbjct: 135 DVANKR 140
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARVGPPSTGAAPAG 333
+A K+ V++ YAE + F+ETSAK S NV FM +A K +GP P G
Sbjct: 136 VANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAK--KLPIGPAQ--GEPTG 191
Query: 332 HVKIDQGQPIDTGKSSCC 279
+D QP K SCC
Sbjct: 192 --TVDMNQPQQQQKGSCC 207
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ER+R ITSAY GA ++V D ++ NV++ L+E+ +A N+ + VGNKC
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKC 126
Query: 514 D 512
D
Sbjct: 127 D 127
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG ERFR + Y A +IV D TD+ +F +V++ L+++DR + ++ N L+GNK
Sbjct: 112 TAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNK 171
Query: 517 CDLPLKRLSTLVQXSNM 467
DL KR T + M
Sbjct: 172 TDLVEKREVTEAEGKAM 188
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 54.8 bits (126), Expect = 8e-08
Identities = 30/87 (34%), Positives = 43/87 (49%)
Frame = -2
Query: 769 IPITFXAKLVTGPPXETSGLXXXSPTAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSN 590
I + F K + PP + TAG ERFR+IT Y A ++++ D T + SF N
Sbjct: 235 IGVDFTVKTMKIPPNRAIAMQLWD-TAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLN 293
Query: 589 VKQCLEEIDRYACDNVNKLLVGNKCDL 509
V+ ++ + D LVGNK DL
Sbjct: 294 VRNWIDSVRAGVDDATVMCLVGNKMDL 320
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG ERFR++T+A+ A I++ D T++ SF N++ L ++ +A C+ + ++ GNK
Sbjct: 72 TAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENRR 138
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQA 402
L ++ V + KQ A+QLG+P+ ETSA S NVE++
Sbjct: 134 LENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG ERFR++T+A+ A I++ D T++ SF N++ L ++ +A C+ + ++ GNK
Sbjct: 72 TAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENRR 138
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQA 402
L ++ V + KQ A+QLG+P+ ETSA S NVE++
Sbjct: 134 LENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/93 (32%), Positives = 52/93 (55%)
Frame = -2
Query: 775 IVIPITFXAKLVTGPPXETSGLXXXSPTAGXERFRTITSAYXXGAHXIIIVXDATDQXSF 596
+ I + F A++VT + TAG E FR+IT +Y GA ++V D T + +F
Sbjct: 37 LTIGVEFGARMVTIDGKQIK--LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTF 94
Query: 595 SNVKQCLEEIDRYACDNVNKLLVGNKCDLPLKR 497
+++ LE+ +++ N+ +L+GNK DL +R
Sbjct: 95 NHLTSWLEDARQHSNSNMVIMLIGNKSDLEARR 127
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV 366
L ++ V + +A + G+ F+ETSAK + NVE+AF+ A EI ++
Sbjct: 123 LEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKI 171
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRY-ACDNVNKLLVGNK 518
TAG E+F ++ Y ++V T Q +F +++ E+I R +NV LLVGNK
Sbjct: 58 TAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNK 117
Query: 517 CDLPLKRLSTLVQXSNMRNNW 455
CDL +R + + +W
Sbjct: 118 CDLSHQRQVRSEEGLALAESW 138
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG E++ + Y G++ +++V D TD+ SF VK + EI + L+VGNK
Sbjct: 68 TAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKI 127
Query: 514 DLPLKRLST 488
DL +R T
Sbjct: 128 DLEEERQVT 136
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR S+Y GA ++V D + ++ +V+Q L+ + +A +++ LVGNK
Sbjct: 64 TAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKS 123
Query: 514 DL 509
DL
Sbjct: 124 DL 125
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -1
Query: 476 KQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEI 378
K YAE+ I F+ETSA + NVE AF + EI
Sbjct: 135 KIYAERNHISFIETSALDNTNVEAAFTNIVTEI 167
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR +T +Y GA ++V D T + +++++ L + N L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 126
Query: 514 DLPLKR 497
DL +R
Sbjct: 127 DLEDQR 132
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV--GPPSTGAAP 339
L ++ V + K +AE+ G+ FLE SAK NVE AF+ A +I + G AA
Sbjct: 128 LEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAAD 187
Query: 338 AGHVKIDQGQP---IDTGKSSC 282
G V+ Q P + GK C
Sbjct: 188 TG-VQPKQNLPRAAENNGKKDC 208
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR++ +Y + ++V D T+ SF + ++++ +V +LVGNK
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 514 DLPLKRLST 488
DL KR T
Sbjct: 126 DLSDKRQVT 134
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEI 378
L+ K+ V ++ A++L + F+ETSAK NV+Q F +A +
Sbjct: 127 LSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGAL 171
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 46.0 bits (104), Expect = 4e-05
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = -2
Query: 781 PXIVIPITFXAKLVTGPPXETSGLXXXSPTAGXERFRTITSAYXXGAHXIIIVXDATDQX 602
P I I F K+V ++ L TAG ERFR + AY A ++V D +D+
Sbjct: 35 PLTTIGIDFKHKIVQLNDGQSIRLQLWD-TAGQERFRQLAPAYIRSARVALLVIDLSDEN 93
Query: 601 SFSNVKQCLEEIDRYACDNVNKLLVGNKCDLPLK----RLSTLVQXSN 470
++ + ID+ D + ++VGNK DL + RL+ +++ +N
Sbjct: 94 CVEHLIRWKGIIDKNKSDFTSTIIVGNKHDLVSEKRSPRLTAIIRETN 141
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEI-DRYACDNVNKLLVGNK 518
TAG ERFR++ +Y + ++V D T+ SF + ++++ + CD V +LVGNK
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCD-VIIVLVGNK 125
Query: 517 CDLPLKR 497
DL KR
Sbjct: 126 TDLADKR 132
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEI 378
LA K+ V ++ A L + F+ETSAK NV+Q F +A +
Sbjct: 128 LADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATAL 172
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG ERFR++ +Y A I+V D + SF V+ +E I ++ +LVGNK
Sbjct: 517 TAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKV 576
Query: 514 DLPLKRLST 488
D+ R+ST
Sbjct: 577 DM---RIST 582
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 467 AEQLGIPFLETSAKXSXNVEQAFMTMAAEIKA 372
A +G+ F+ETSA N++ A + + E+ A
Sbjct: 595 AAAMGVLFMETSALDGSNIDNAMLALTRELMA 626
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E+F + Y ++V T Q +F+++ ++I R D V +LVGNK
Sbjct: 58 TAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNK 117
Query: 517 CDLPLKRLSTLVQXSNM 467
CDL +R+ Q N+
Sbjct: 118 CDLEDERVVGKDQGQNL 134
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKAR 369
L ++VV + A Q G FLETSAK NV + F + +I R
Sbjct: 120 LEDERVVGKDQGQNLARQFGSAFLETSAKAKINVSEVFYDLVRQINRR 167
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = -2
Query: 694 TAGXERFR-TITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC---DNVNKLLV 527
TAG ER+R +I + Y + ++ V D T + SF+++ ++E +++ V ++L+
Sbjct: 156 TAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILI 215
Query: 526 GNKCDLP-LKRLST 488
GNKCD+ R+ST
Sbjct: 216 GNKCDVECTNRVST 229
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARVGPPSTGAAPAG 333
LA + VD S +AE+L IP+ ETSA+ + NV + F A I+ P +
Sbjct: 119 LAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKPNIERRKWSS 178
Query: 332 HVKIDQGQPIDTGKSSCC*ILPAYS 258
+I + + +S CC ++P ++
Sbjct: 179 ESEIGDKKCKNWLRSCCCCLIPCFA 203
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG E+F + Y A ++V + +F N+KQ +I V +LVGNK
Sbjct: 58 TAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKS 117
Query: 514 DL 509
DL
Sbjct: 118 DL 119
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E + + Y ++V + SF NV E+I R D+V +LVGNK
Sbjct: 58 TAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNK 117
Query: 517 CDL 509
CDL
Sbjct: 118 CDL 120
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
+ + VDF T + A+ GIP ++TSAK V++AF T+ EI+
Sbjct: 121 SSRSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIR 164
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E F T+ Y +IV TD+ SF VK+ E I R D+ +LVGNK
Sbjct: 72 TAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENER 138
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 476 KQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
++ A +L IP+LE SAK NV++AF + ++
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E F T+ Y +IV TD+ SF VK+ E I R D+ +LVGNK
Sbjct: 72 TAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENER 138
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 476 KQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
++ A +L IP+LE SAK NV++AF + ++
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E + + Y ++V + SF NV E+I R D+V +LVGNK
Sbjct: 61 TAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNK 120
Query: 517 CDL 509
CDL
Sbjct: 121 CDL 123
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
+ + VDF T + A+ GIP ++TSAK V++AF T+ EI+
Sbjct: 124 SSRSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIR 167
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E F T+ Y +IV TD+ SF VK+ E I R D+ +LVGNK
Sbjct: 72 TAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENER 138
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYA-CDNVNKLLVGNK 518
TAG E F T+ Y +IV TD+ SF VK+ E I R D+ +LVGNK
Sbjct: 72 TAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNK 131
Query: 517 CDLPLKR 497
DL +R
Sbjct: 132 ADLENER 138
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 476 KQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
++ A +L IP+LE SAK NV++AF + ++
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 688 GXERFRTITSAYXXGAHXIIIVXDATDQXSF-SNVKQCLEEIDRYACDNVNKLLVGNKCD 512
G RFR++ Y G + I+ + DA D+ ++ + ++ +D+ D + L++GNK D
Sbjct: 74 GQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKD 133
Query: 511 LP 506
LP
Sbjct: 134 LP 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 688 GXERFRTITSAYXXGAHXIIIVXDATDQXSF-SNVKQCLEEIDRYACDNVNKLLVGNKCD 512
G RFR++ Y G + I+ + DA D+ ++ + ++ +D+ D + L++GNK D
Sbjct: 74 GQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKD 133
Query: 511 LP 506
LP
Sbjct: 134 LP 135
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG E+F + Y II+ D T + ++ NV ++ R C+N+ +L GNK
Sbjct: 65 TAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLAR-VCENIPIVLCGNKV 123
Query: 514 DL 509
D+
Sbjct: 124 DV 125
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -1
Query: 503 KKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARVG 363
++VV +Q AEQ G ++ETSAK NV++ F + E+K R G
Sbjct: 138 QRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMREMKRRKG 184
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = -2
Query: 769 IPITFXAKLVTGPPXETSGLXXXSPTAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSN 590
+ + F A+++ P L TAG E+FR+IT +Y + ++ + D T++ SF +
Sbjct: 50 VGVDFYARMIELRPGYRVKLQLWD-TAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEH 108
Query: 589 VKQCLEE 569
V+ ++E
Sbjct: 109 VENWVKE 115
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKARV 366
+++ V++ + +A+ + F+ETS++ NV +AF +A EI+ RV
Sbjct: 141 SQRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQNRV 187
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC----DNVNKLLV 527
TAG ERF+++ A+ GA ++ D T+ SF ++ +E A D+ +L+
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 124
Query: 526 GNKCDLPLKR 497
GNK DL +R
Sbjct: 125 GNKVDLESQR 134
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -1
Query: 521 QV*LATKKVVDFSTXKQYAEQLG-IPFLETSAKXSXNVEQAFMTMAAEIKAR 369
+V L +++ V + + + G IP+ E SAK + NVE AF+ +A + AR
Sbjct: 127 KVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALAR 178
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = -1
Query: 503 KKVVDFSTXK--QYAEQLGIPFLETSAKXSXNVEQAFMTMAAEI 378
K V D +T + +A++ G+ F+ETSAK + +VE+AF+ A EI
Sbjct: 124 KAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEI 167
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.089
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = -2
Query: 691 AGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC----DNVNKLLVG 524
+G +R+ +T Y AH IIV D+T + + + ++D+ V +L+
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 523 NKCDLPLK 500
NKCD+ K
Sbjct: 129 NKCDIDNK 136
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.089
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = -2
Query: 691 AGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYAC----DNVNKLLVG 524
+G +R+ +T Y AH IIV D+T + + + ++D+ V +L+
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 523 NKCDLPLK 500
NKCD+ K
Sbjct: 129 NKCDIDNK 136
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 682 ERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKCDL 509
E+F + Y II+ D T + ++ NV ++ R C+N+ +L GNK D+
Sbjct: 3 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLAR-VCENIPIVLCGNKVDV 59
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -1
Query: 512 LATKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIK 375
+ K+VV +Q A LGIPFLE S+K + V +AF + + I+
Sbjct: 333 MRVKRVVTSFEGQQLARTLGIPFLEVSSKQNDCVFEAFEELVSLIQ 378
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -2
Query: 643 AHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKCDLPLKRLST 488
++ III+ D+ SF + + + ++ N +LVG+K D+ +KR+ T
Sbjct: 289 SNGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVT 340
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 470 YAEQLGIPFLETSAKXSXNVEQAFMTMAAEI 378
+A + G+ F+E SAK + VE+AF+ A EI
Sbjct: 137 FAREFGLIFMEISAKTNEYVEEAFVNSAHEI 167
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQC-LEEIDRYACDNVNKLLVGNK 518
TAG + I A+ ++ D+ + + + + EI +YA DNV +LVG K
Sbjct: 59 TAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTK 118
Query: 517 CDL 509
DL
Sbjct: 119 NDL 121
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG E + + I++ S N+ + R+ C NV +LVGNK
Sbjct: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKR 119
Query: 514 DL 509
DL
Sbjct: 120 DL 121
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 694 TAGXERFRTITSAYXXGAHXIIIVXDATDQXSFSNVKQCLEEIDRYACDNVNKLLVGNKC 515
TAG E + + I++ S N+ + R+ C NV +LVGNK
Sbjct: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKR 119
Query: 514 DL 509
DL
Sbjct: 120 DL 121
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 506 TKKVVDFSTXKQYAEQLGIPFLETSAKXSXNVEQAFMTMAAEIKAR 369
+K+ V ++ ++ A + F+ETSAK + N+ + F + A K R
Sbjct: 58 SKREVSSNSGQKVATNMECGFIETSAKNNENITELFQQLLALEKKR 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,267,707
Number of Sequences: 27780
Number of extensions: 264035
Number of successful extensions: 739
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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