Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0543.Seq
         (869 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   136   1e-33
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.7  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   4.0  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   9.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  136 bits (328), Expect = 1e-33
 Identities = 64/84 (76%), Positives = 73/84 (86%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T
Sbjct: 62  VPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVK 254
           +VY+AILEDLVFPAE+VGKRIRVK
Sbjct: 122 AVYDAILEDLVFPAEVVGKRIRVK 145



 Score = 94.7 bits (225), Expect = 3e-21
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +2

Query: 251 QVDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 394
           ++DGSQLIKVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFPE YL
Sbjct: 145 KLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 411 VIG*VYK*GSGNSKVTSRPVSFLYTDWKV 325
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 328 LPVCIQEANGTRSDLRVPRTLFVNLAYD 411
           LPV  Q+   T     +PRT  V   YD
Sbjct: 46  LPVAYQQKAATSGPFHMPRTEHVGYTYD 73


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 513 VVLQRRDWENXGV-TQLNRLAAHPPFASWVIAKRPAPDXPSQQLRS 647
           V + RR W   G+ + LN +   PPF +  +  +P P+    +LR+
Sbjct: 66  VAVARRRW---GIPSTLNVVDLSPPFPNTNVILKPYPNFALNELRA 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,963
Number of Sequences: 2352
Number of extensions: 15799
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)