Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0543.Seq
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   137   2e-32
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   137   2e-32
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   137   2e-32
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   137   2e-32
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   137   2e-32
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   137   2e-32
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    30   3.6  

>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  137 bits (332), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVKWTAHSSLRCT*TKTNRLLLNIKWTPSSLYTR 347
           +VY+AILEDLVFPAEIVGKRIRVK      ++    K  +  +  K + S L+ +
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVSISILHLK 176


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  137 bits (332), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVKWTAHSSLRCT*TKTNRLLLNIKWTPSSLYTR 347
           +VY+AILEDLVFPAEIVGKRIRVK      ++    K  +  +  K + S L+ +
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVSISILHLK 176


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  137 bits (331), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVK 254
           +VY+AILEDLVFPAEIVGKRIRVK
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVK 145



 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 251 QVDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 394
           ++DGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 145 KLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  137 bits (331), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVK 254
           +VY+AILEDLVFPAEIVGKRIRVK
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVK 145



 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 251 QVDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 394
           ++DGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 145 KLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  137 bits (331), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVK 254
           +VY+AILEDLVFPAEIVGKRIRVK
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVK 145



 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 251 QVDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 394
           ++DGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 145 KLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  137 bits (331), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +3

Query: 3   VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLT 182
           VP+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT
Sbjct: 62  VPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLT 121

Query: 183 SVYNAILEDLVFPAEIVGKRIRVK 254
           +VY+AILEDLVFPAEIVGKRIRVK
Sbjct: 122 AVYDAILEDLVFPAEIVGKRIRVK 145



 Score = 93.1 bits (221), Expect = 5e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +2

Query: 251 QVDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 394
           ++DGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 145 KLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +3

Query: 15  KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRT 176
           KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K+P ++T
Sbjct: 577 KLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRKQPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,748,747
Number of Sequences: 53049
Number of extensions: 698833
Number of successful extensions: 1435
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)