Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0542.Seq
         (953 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.6  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   3.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   8.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   8.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   8.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = -1

Query: 944 GFFNRKXFWXPFLXWNYRGXWHXICPPNCPS 852
           GF  R  F    L WNY   W   C     S
Sbjct: 742 GFLRRHNFKGLHLDWNYPVCWQSNCKKGASS 772


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 24  GDWGLQLSPINEEFLVSASHK 86
           G  G+Q+SP NE  +V++S++
Sbjct: 52  GFGGVQISPPNENLVVTSSNR 72


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 24  GDWGLQLSPINEEFLVSASHK 86
           G  G+Q+SP NE  +V++S++
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 24  GDWGLQLSPINEEFLVSASHK 86
           G  G+Q+SP NE  +V++S++
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 635 VDKARHLKDASPVLDHAICKSYPDSSKLTTSDARP 531
           +D + H    SP +DH  C S  D + L+  +  P
Sbjct: 1   MDSSDHFDRESPNIDHNSCSS--DDTVLSVGNENP 33


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 239 TTTKISPTEAPSGLTPRPFCALRRARVVICLSQRLSHACLSAS 367
           +T + SP E  S L+P+   +   +     + + LSHA + ++
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSA 194


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 623 RHLKDASPVLDHAICKSYPDSSKLTTSDARP 531
           RH+K A PV+  + C     S++L      P
Sbjct: 68  RHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 278 LTPRPFCALRRARVVICLSQRLSH 349
           + PRP C LR   +V  L   L H
Sbjct: 1   MIPRPRCKLRTVLIVTLLVVLLVH 24


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 239 TTTKISPTEAPSGLTPRPFCALRRARVVICLSQRLSHACLSAS 367
           +T + SP E  S L+P+   +   +     + + LSHA + ++
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSA 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,642
Number of Sequences: 336
Number of extensions: 3886
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26892580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)