Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0542.Seq
         (953 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM183993-1|CAJ75481.1|  229|Homo sapiens immunoglobulin heavy ch...    31   6.2  

>AM183993-1|CAJ75481.1|  229|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 229

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
 Frame = +1

Query: 142 LLELRID*LASNYCSRETLLHVSPPGPRWSICYYH--QDLTDGGSKRAHAQTLLRSPSRT 315
           L  L+ D  A  YC+RE +LH    G   S+ YYH   DL   G+    +    + PS  
Sbjct: 78  LSRLKSDDTAVYYCAREPVLH----GYYRSVRYYHYGMDLWGQGTTVTVSLASTKGPS-- 131

Query: 316 SSYMLVSKIKPCMSQCKPY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAI-RTLTSD 492
                V  + PC        G  A G + + +F    +V+W +  +   +H     L S 
Sbjct: 132 -----VFPLAPCSRSTSG--GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS 184

Query: 493 GM 498
           G+
Sbjct: 185 GL 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,060,563
Number of Sequences: 237096
Number of extensions: 2662338
Number of successful extensions: 5302
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5302
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12603135794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)