Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0541.Seq
         (928 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.48 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.9  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   7.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   7.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 231 ITISIHWL*SCNYY*TIPIYRKYLIFYAKMCTFYIFIIYTVN 106
           I  ++H+L  C YY     Y  ++I       +Y FII+TV+
Sbjct: 90  IIFTVHFL-LCTYY----FYYAFIILLCVYYFYYAFIIFTVH 126


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 566 PLSPAGVIAKRPAPIALPNSCA 631
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 642  AIPGAQLLGRAIGAGLFAITPAGERGMCCKAIKLGNARVF 523
            A PG  ++G  +    F++  A +RG+  K+   G A  F
Sbjct: 2554 ADPGKIVMGMPLYGQSFSLADAADRGLNAKSYGPGEAGEF 2593


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 572 SPAGVIAKRPAPIALPNSCA 631
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 572 SPAGVIAKRPAPIALPNSCA 631
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 183 IPIYRKYLIFYAKMCTFYIFI 121
           +P+Y  YL+ + +   F  F+
Sbjct: 174 LPVYVSYLLIFVQQIPFCFFV 194


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 177 IYRKYLIFYAKMCTFYIFIIYTVNK 103
           IY K    Y K+    +F+IYT+ +
Sbjct: 23  IYDKPTKLYQKLYPVLMFLIYTITE 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,309
Number of Sequences: 336
Number of extensions: 5040
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)