Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0541.Seq
         (928 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    25   3.3  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   3.3  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    24   5.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.9  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 524 SQSRRLKRRPVNC 486
           S  RRL RRPVNC
Sbjct: 73  SDGRRLVRRPVNC 85


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 126 KCKMYTFLHKISSIFCKLELSNNSYMIIANELKLLSCCLSNMINV*IKL 272
           KC + +F H +S I     LSN+S   + + ++ L   L + +N  ++L
Sbjct: 743 KCSVISFSHSLSPISFNYTLSNSSLSRVLS-IRDLGIILDSRLNFKLQL 790


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 316 LINTLFMNYFHYSI 275
           LIN L  NY HYS+
Sbjct: 213 LINCLLRNYLHYSL 226


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 526 NPGVTQLNRLAAHPPFASWRNS 591
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 942,540
Number of Sequences: 2352
Number of extensions: 19221
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)