Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0537.Seq
         (947 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    26   0.49 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    25   0.65 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.86 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.86 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   0.86 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   0.86 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   1.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
 Frame = -1

Query: 284 LKLVKSCLSIIDS-DSTIQVKVSFLFYSTLYRRSEF*QL*KKKTLI-----SNQAVIFLH 123
           + + K+C+S  +    T  +    L    ++ ++   QL +K+ L+       + V F  
Sbjct: 304 IMITKACMSASNLIQRTPNICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMGQRQVAFKV 363

Query: 122 RGYISLKYGSLY*TSLFCHDDENVLFFRTFSK 27
            G++++ YG+LY  SLF     NV+    F K
Sbjct: 364 GGFLNIDYGTLY--SLFGSTAMNVIILLQFQK 393


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 149 SNQAVIFLHRGYISLKYGSLY*TSLFCHDDENVLF 45
           S   V+++H G     YGS Y    F   D+N++F
Sbjct: 111 SFDVVVYIHSGAFMTGYGSFYQPDYFI--DKNIVF 143


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 149 SNQAVIFLHRGYISLKYGSLY*TSLFCHDDENVLF 45
           S   V+++H G     YGS Y    F   D+N++F
Sbjct: 111 SFDVVVYIHGGAFMTGYGSFYQPDYFI--DKNIVF 143


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 149 SNQAVIFLHRGYISLKYGSLY*TSLFCHDDENVLF 45
           S   V+++H G     YGS Y    F   D+N++F
Sbjct: 111 SFDVVVYIHGGAFMTGYGSFYQPDYFI--DKNIVF 143


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 149 SNQAVIFLHRGYISLKYGSLY*TSLFCHDDENVLF 45
           S   V+++H G     YGS Y    F   D+N++F
Sbjct: 111 SFDVVVYIHGGAFMTGYGSFYQPDYFI--DKNIVF 143


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 149 SNQAVIFLHRGYISLKYGSLY*TSLFCHDDENVLF 45
           S   V+++H G     YGS Y    F   D+N++F
Sbjct: 111 SFDVVVYIHGGAFMTGYGSFYQPDYFI--DKNIVF 143


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +1

Query: 391 LRCISLFCTIVLDLLRSLASWRAWWSLMS 477
           +R +SL+ +++  LLR     R+W+ L++
Sbjct: 16  IRDLSLYFSVIYSLLRVKRMMRSWYYLLT 44


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 20  INVLKRYGKTKHFHRRDRINLFNI 91
           IN+LK Y  T   H++ R + F +
Sbjct: 128 INLLKHYQSTTDLHKKIRYSAFGM 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,960
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26685714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)