Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0537.Seq
         (947 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56023-1|CAA39500.1|  548|Drosophila melanogaster swallow protein.     31   3.1  
AY069487-1|AAL39632.1|  548|Drosophila melanogaster LD21771p pro...    31   3.1  
AE014298-885|AAF46160.3|  548|Drosophila melanogaster CG3429-PA ...    31   3.1  
AE014296-1818|AAN11915.1|  357|Drosophila melanogaster CG32065-P...    30   5.3  

>X56023-1|CAA39500.1|  548|Drosophila melanogaster swallow protein.
          Length = 548

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 462 PCPPRGQGSQQVEDDRTKEADAAKESRPSVMRRTTQGGE 346
           P P   + SQ   +D   E +A +E RPS  R+  Q GE
Sbjct: 387 PAPNNSETSQPSSNDSAIEVEAHEEERPSSRRQWEQQGE 425


>AY069487-1|AAL39632.1|  548|Drosophila melanogaster LD21771p
           protein.
          Length = 548

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 462 PCPPRGQGSQQVEDDRTKEADAAKESRPSVMRRTTQGGE 346
           P P   + SQ   +D   E +A +E RPS  R+  Q GE
Sbjct: 387 PAPNNSETSQPSSNDSAIEVEAHEEERPSSRRQWEQQGE 425


>AE014298-885|AAF46160.3|  548|Drosophila melanogaster CG3429-PA
           protein.
          Length = 548

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 462 PCPPRGQGSQQVEDDRTKEADAAKESRPSVMRRTTQGGE 346
           P P   + SQ   +D   E +A +E RPS  R+  Q GE
Sbjct: 387 PAPNNSETSQPSSNDSAIEVEAHEEERPSSRRQWEQQGE 425


>AE014296-1818|AAN11915.1|  357|Drosophila melanogaster CG32065-PA
           protein.
          Length = 357

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -3

Query: 507 STRWSNSV-LSGHQAPPCPPRGQGSQQVEDDRTKEADAAKESRPSVMRRTTQGGEGPYCQ 331
           S RW N+  L GH +  C P    +   +    K  ++   S  + +RR  QG +   C 
Sbjct: 74  SPRWKNNFHLHGHNSAHCQPHDPHTDPPQKKAIKRDESELRSETNFVRR-RQGQQRAACN 132

Query: 330 FMH 322
             H
Sbjct: 133 LQH 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,383,206
Number of Sequences: 53049
Number of extensions: 754778
Number of successful extensions: 1981
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4710216690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)